DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and Trex1

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_035767.4 Gene:Trex1 / 22040 MGIID:1328317 Length:314 Species:Mus musculus


Alignment Length:315 Identity:51/315 - (16%)
Similarity:103/315 - (32%) Gaps:108/315 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 HGSLESAVELNKDPTLFVKTIFPIESSKSESDDMHEDDKFPRTKLLLSALQ-------MVDEGYP 326
            ||.:::.:.|:.:.|       .:.||:.|.           |:|.|.|:.       .:.:|:|
Mouse     8 HGHMQTLIFLDLEAT-------GLPSSRPEV-----------TELCLLAVHRRALENTSISQGHP 54

  Fly   327 IPLQGELHTRFQNFKFTKDLYAPVTNRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLV 391
            .|:.                      |.|.......:|                          :
Mouse    55 PPVP----------------------RPPRVVDKLSLC--------------------------I 71

  Fly   392 LPNNRITDYLTQYSGIT-AEIMEQVTKRLD----VVQKEVSELLPPDAILVGQS--------LNS 443
            .|....:...::.:|:: ||:..|..:|.|    ::.:...:..|....||..:        |.:
Mouse    72 APGKACSPGASEITGLSKAELEVQGRQRFDDNLAILLRAFLQRQPQPCCLVAHNGDRYDFPLLQT 136

  Fly   444 DLNAMKMMHPYVIDTSVCFNT-------------SGVRRRKTKLKDLAKTFLQEIIQENIDGHDS 495
            :|  .::..|..:|.:.|.::             ||...||:  ..|...:.:...|...|.|.:
Mouse   137 EL--ARLSTPSPLDGTFCVDSIAALKALEQASSPSGNGSRKS--YSLGSIYTRLYWQAPTDSHTA 197

  Fly   496 IEDSRATLKLVKKKLANSIEFGDQILTQHKQLQEL--ANASSGDTISNNLFAHVA 548
            ..|....|.:.:.|....:::.|:.......::.:  ..|::|.|   ||..|.|
Mouse   198 EGDVLTLLSICQWKPQALLQWVDEHARPFSTVKPMYGTPATTGTT---NLRPHAA 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 26/175 (15%)
Trex1NP_035767.4 TREX1_2 14..211 CDD:99839 40/266 (15%)
Necessary for endoplasmic reticulum localization. /evidence=ECO:0000269|PubMed:18724932 236..314 7/17 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..284 7/16 (44%)
Interaction with UBQLN1. /evidence=ECO:0000250|UniProtKB:Q9NSU2 244..314 3/6 (50%)
Necessary for cytoplasmic retention. /evidence=ECO:0000269|PubMed:18724932 281..314
Blue background indicates that the domain is not in the aligned region.

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