DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and Pan2

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_006513048.1 Gene:Pan2 / 103135 MGIID:1918984 Length:1205 Species:Mus musculus


Alignment Length:502 Identity:119/502 - (23%)
Similarity:197/502 - (39%) Gaps:91/502 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LEADSQTAPGTSDPEEPV--NKKIRNYDAGGDSLP------LEIGSLSEDQYNQLSA-------- 131
            ||.::|......:..:|.  .:.||:       ||      .|:.|..|..:.:|.|        
Mouse   710 LEQNTQAWCDNCEKYQPTIQTRNIRH-------LPDILVINCEVNSSKEADFWRLQAEVAFKIAV 767

  Fly   132 -----ELRRRKRELENVPALRLREMGQRASLETPQDARTP----IFLTDIQNLLMC--------A 179
                 |::.::..|.:...||..|....:|:|..::...|    :.:|..:.|.:|        :
Mouse   768 KKYGGEMKSKEFALADRKELRSPEGFLCSSIEELKNVWLPFSIRMKMTKNKGLDVCNWADEHELS 832

  Fly   180 LIG---QKSPCRPDRWCSVEKWLSLSHSVVVILE----GLSLYHYLSNETQFE----ATNRIFST 233
            .:|   |..|.|.:....|..: .|..:||.||:    |..:.|....||..:    .|::.:..
Mouse   833 SLGAPSQWGPARAEEELGVYVY-DLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYL 896

  Fly   234 KLEMILPPQEEGQKI-IDEIAKIPLTNAQARRLIDEHGSLESAVELNKDPTLFVKTIFPIESS-- 295
            ..:.::.|.::.:.: .|...|:|......:|      :|.|...||      :|.  |||:|  
Mouse   897 FNDFLIEPIDKYEAVQFDMNWKVPAILYYVKR------NLNSRYNLN------IKN--PIEASVL 947

  Fly   296 KSESDDMHEDDKFPRTKLLLSALQMVDEGYPIPLQGELHTRFQNFKFTKDLYAPVTNRSPMFGVD 360
            .:|:....:..|...|.:.|...:|...|..:.|..|..|..:.....:......|.:.....|.
Mouse   948 LAEASLARKQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVA 1012

  Fly   361 CEMCHTEAGCNELTRISIVNENYETVYETLVLPNNRITDYLTQYSGI-----TAEIMEQVTKRLD 420
            ...|....|.||  .|..:::...|        ..::.|||||||||     .|:|..:....|.
Mouse  1013 RITCVRGQGPNE--GIPFIDDYIST--------QEQVVDYLTQYSGIKPGDLDAKISSKHLTTLK 1067

  Fly   421 VVQKEVSELLPPDAILVGQSLNSDLNAMKMMHP--YVIDTSVCFNTSGVRRRKTKLKDLAKTFLQ 483
            ....::..|:......||..|..|...:.:|.|  .|:||...|:..  |:|...|:.||..||.
Mouse  1068 STYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMP--RKRMISLRFLAWYFLD 1130

  Fly   484 EIIQENIDGHDSIEDSRATLKLVKKKLANSIEFGDQILTQHKQLQEL 530
            ..||.  :.||||||:|..|:|.:|.|..| :.|.:..:.||.|:.|
Mouse  1131 LKIQG--ETHDSIEDARTALQLYRKYLELS-KNGTEPESFHKVLKGL 1174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 48/156 (31%)
Pan2XP_006513048.1 WD40 75..357 CDD:475233
UCH_1 516..902 CDD:463872 39/199 (20%)
PAN2_exo 979..1152 CDD:99846 52/186 (28%)
Blue background indicates that the domain is not in the aligned region.

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