DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rexo5 and Trex1

DIOPT Version :10

Sequence 1:NP_648050.1 Gene:Rexo5 / 38740 FlyBaseID:FBgn0286051 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001020160.1 Gene:Trex1 / 100049583 RGDID:1311998 Length:316 Species:Rattus norvegicus


Alignment Length:210 Identity:38/210 - (18%)
Similarity:76/210 - (36%) Gaps:28/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 NRITDYLTQYSGITAEIMEQVTKRLDVVQKEVSELLPPDAILVGQS--------LNSDLNAMKMM 451
            :.||...|  :|:.|...::....|..:.:...:..|....||..:        |.::|.::.::
  Rat    82 SEITGLTT--AGLEAHGRQRFNDNLATLLQVFLQRQPQPCCLVAHNGDRYDFPLLQAELASLSVI 144

  Fly   452 HPYVIDTSVCFNTSGVRRRKT-------------KLKDLAKTFLQEIIQENIDGHDSIEDSRATL 503
            .|  :|.:.|.::  :...||             |...|...:.:...|...|.|.:..|..|.|
  Rat   145 SP--LDGTFCVDS--IAALKTLEQASSPSEHGPRKSYSLGSIYTRLYGQAPTDSHTAEGDVLALL 205

  Fly   504 KLVKKKLANSIEFGDQILTQHKQLQEL-ANASSGDTISNNLFAHVAKRDKRTAIVTVGELQPRLK 567
            .:.:.|....:::.|:.......::.: ..|::..|.|..|.|........||.::....:.|.|
  Rat   206 SICQWKPQALLQWVDKHARPFSTIKPMYGMAATTGTASPRLCAATTSSPLATANLSPSNGRSRGK 270

  Fly   568 EVIEKAGEAAPKDQS 582
            .......|..|:..|
  Rat   271 RPTSPPPENVPEAPS 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rexo5NP_648050.1 REX1_like 357..507 CDD:99848 24/132 (18%)
Trex1NP_001020160.1 TREX1_2 14..211 CDD:99839 24/134 (18%)

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