DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and st14b

DIOPT Version :10

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_001429317.1 Gene:st14b / 777629 ZFINID:ZDB-GENE-061103-613 Length:864 Species:Danio rerio


Alignment Length:520 Identity:147/520 - (28%)
Similarity:211/520 - (40%) Gaps:149/520 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 PEPDQFSCFGQQECIPAARWCDNVVDCSDGSDESACTCADRVDEERL-------------CDGYE 943
            |.|.:|.| ....||.:.:.||...||.|.|||..|.|    :|.::             |||..
Zfish   463 PCPGRFEC-DNDLCISSDQHCDGYNDCGDMSDERGCMC----NETQIQCKNGFCKPSFWGCDGVN 522

  Fly   944 DCPMGEDELGCFGCESLAYSCYENPQDFAKRNRSTISMCYSRLERCDGFMNCLNGRDEEQCSMLV 1008
            ||....||..|..|::..:.|           ||  ..|.|..::|:|:.:|.:|.||.:|:   
Zfish   523 DCGDNTDEENCGNCKTWEFRC-----------RS--GRCISAQKQCNGYNDCGDGSDESRCA--- 571

  Fly  1009 TDVADHMSHGASASEGYLYHNYRGDWHPVCNNGEKWAALACQMDENSRMDHSASLNVSFQTLTLP 1073
            ..:|.|.|..          .|:      |.|.                          |.::..
Zfish   572 KSIAVHCSDS----------TYK------CKNK--------------------------QCISKL 594

  Fly  1074 GPFIEPSLHAGVHFAQACHGRNSHDSLVDHVAYVKCPPMQCG-LPSKSSMLEHSKRVRRAVSDSK 1137
            .|.              |.|..   ..||.....:|   :|| .|.|||                
Zfish   595 NPM--------------CDGET---DCVDGSDEAEC---KCGKKPHKSS---------------- 623

  Fly  1138 EIVGDGRIVGGSYTSALQWPFVVAIYRNGKFH-CGGTIYSDRWIISAAHCVINYGKYFY------ 1195
                  |||||..:...:||:.|:::...:.| ||.::.|:.|:::|||||.:..::.|      
Zfish   624 ------RIVGGKDSDEGEWPWQVSLHMKTQGHVCGASVISNSWLVTAAHCVQDNDQFRYSQADQW 682

  Fly  1196 EVRAGLLRRSSYSPATQIQPVSHVVVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGRT 1260
            ||..||..:...|.:|| :.|..::.|..|:..|..||::|:.|.:|:..|:.:.||||||....
Zfish   683 EVYLGLHNQGETSKSTQ-RSVLRIIPHPQYDHSSYDNDIALMELDSPVTLNQNIWPICLPDPTHY 746

  Fly  1261 TVGDDWIWGPVEHTLCTVVGWGAIREKGPSSDPMRQVIVPIRKK------CTDPEDQ--ASEDIC 1317
            ......:|         :.|||.:||   .||.:..|:.....:      |:...|.  ....||
Zfish   747 FPAGKSVW---------ITGWGKLRE---GSDAVPSVLQKAEVRIINSTVCSKLMDDGITPHMIC 799

  Fly  1318 AGDPDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEMAT 1382
            ||...||.||||||||||:  .|:......:||||||.|:||.|....|||||||.|..|:...|
Zfish   800 AGVLSGGVDACQGDSGGPM--SSIEGNGRMFLAGVVSWGDGCGRRNRPGVYTRVTDYRSWIREIT 862

  Fly  1383  1382
            Zfish   863  862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060 14/34 (41%)
Tryp_SPc 1145..1379 CDD:238113 88/248 (35%)
LDLa 1399..1430 CDD:238060
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
st14bNP_001429317.1 None
Blue background indicates that the domain is not in the aligned region.

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