DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ndl and zgc:92313

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_001002596.1 Gene:zgc:92313 / 436869 ZFINID:ZDB-GENE-040718-339 Length:309 Species:Danio rerio


Alignment Length:255 Identity:90/255 - (35%)
Similarity:133/255 - (52%) Gaps:35/255 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 RIVGGSYTSALQWPFVVAIY-RNGKFHCGGTIYSDRWIISAAHCVINYGKYF-YEVRAGLLRRSS 1206
            ||||||..:...||:.|.|. ...|..|||||.|:.|::|||||..|..... |.:.||..:.:.
Zfish    34 RIVGGSSAADGAWPWQVDIQGEKSKHVCGGTIISENWVLSAAHCFPNPNDISGYLIYAGRQQLNG 98

  Fly  1207 YSPATQIQPVSHVVVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGPV 1271
            ::|......:|.|||...|....:..|::|:.|..|..:...::|:|||            :..|
Zfish    99 WNPDETSHRISRVVVPLGYTDPQLGQDIALVELATPFVYTERIQPVCLP------------YANV 151

  Fly  1272 EHT---LCTVVGWGAIRE----KGPSSDPMRQVIVPI--RKKC-----TDPE---DQASEDICAG 1319
            |.|   .|.:.|||.|||    :|..  |:::|.|||  .:.|     |:|.   |...:.:|||
Zfish   152 EFTSDMRCMITGWGDIREGVALQGVG--PLQEVQVPIIDSQICQDMFLTNPTENIDIRPDMMCAG 214

  Fly  1320 DPDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLE 1379
            ...||:|:|||||||||.|: :|: ..:..||:||.|.|||.....|||.:|:.:.::::
Zfish   215 FQQGGKDSCQGDSGGPLACQ-ISD-GSWVQAGIVSFGLGCAEANRPGVYAKVSSFTNFIQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 90/251 (36%)
Tryp_SPc 1145..1379 CDD:238113 89/252 (35%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
zgc:92313NP_001002596.1 Tryp_SPc 34..271 CDD:214473 90/252 (36%)
Tryp_SPc 35..274 CDD:238113 89/254 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.