DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ndl and mas

DIOPT Version :10

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_523919.1 Gene:mas / 38499 FlyBaseID:FBgn0011653 Length:1047 Species:Drosophila melanogaster


Alignment Length:1212 Identity:266/1212 - (21%)
Similarity:387/1212 - (31%) Gaps:446/1212 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 RNVTTTSASSEPIVDTENTNSDHVPTTENGLVFNITTDGPVETTKSTAQRKLSFDWILDGEENVE 410
            :|.|...|::.|    :.|.:....||:.    ..||.....|||.|.....:      .:...:
  Fly    94 KNATAVRATTTP----KTTTTASTTTTQR----TTTTVATTSTTKRTTTTSTT------PKPKPK 144

  Fly   411 PEVKSTNTTTTTAAT-TTTGATSETIIVTTELPKITFDWIIDGREVVEPQETTTEVTG------- 467
            |:.|...|::||.|| .||...|.|..|.|..||       |..|..:..:...:.||       
  Fly   145 PQTKRPATSSTTKATVATTKKPSTTKKVATAKPK-------DKEEATKADDANKDCTGVCVADRI 202

  Fly   468 --------TTERL----------------RKMPFDWIIDGE------------EVVEPQENVTTT 496
                    |::.|                .|:|.|..|..:            |...|.::.:|:
  Fly   203 AEYCEAYLTSDGLCKEGTKCCVSLDEYSNGKLPKDIYIPAKHMSNLKPNQTLSEKSAPAKSSSTS 267

  Fly   497 TIATTVAVSTTEINE--RIHNSTAYPTKPKPVKFDWIIDGGESSGEVSTSSTSQPKLTTREAISN 559
            |.:||...|||...|  ||:||:..|||.|                      ..|..||.||.  
  Fly   268 TTSTTTTTSTTTTPEPARINNSSPKPTKHK----------------------KHPTTTTTEAA-- 308

  Fly   560 PESPRSSHPLDNPTSIENMLESFEQHEEQKPILRVLNANESSSETVTDGYERQLWLKKFEDQARP 624
                                   |:.|||              ||..||          |::..|
  Fly   309 -----------------------EEEEEQ--------------ETEEDG----------EEEEPP 326

  Fly   625 NQNELIDTFGTALDAKALDKMGPKINPLNGHTWNAADAQILSLCERVALRMRNKVATMSD----- 684
            ..|:|              |.|            ....|:|..||...  |....|...|     
  Fly   327 LSNKL--------------KSG------------QGQGQVLKECEGEC--MNGIFAIFCDDIDSD 363

  Fly   685 ----GETK--EKGETFTASPSVQFTSRAPGGFPVSGETMKASAQFMFNPNFGMPSIPVCFYMTPA 743
                ||..  ..|....|:||    |:||...|......|.:|:         |:.|        
  Fly   364 AFCPGEESCCVTGGASEATPS----SKAPPTKPAIKHAPKPAAK---------PARP-------- 407

  Fly   744 NFRMPMWSNTPTFMGMQGAHFGGSSNPGAGIFFVPQQFGPSGNFFGGSGGSGAGGQGANIFS--- 805
                                   :|.|.|         .||..    |||.|.|...:.|.|   
  Fly   408 -----------------------ASPPPA---------PPSST----SGGGGGGDFLSQIISFAE 436

  Fly   806 ----KNASPQKPTNGQQQV--------------YC---SYMQNQSGQGAGQSQTSSQQQQGGQSA 849
                ..:.|..|.....||              :|   |.:.:.....|..|......:.|....
  Fly   437 STLNSPSPPPPPPQAPIQVPRCPGFCLLNIMAAFCERPSVLVSTPTTCAKGSVCCDNSRAGAPKP 501

  Fly   850 FSNANFKMRHANQTNTANQQGQIIYASYAGLPQQPIQE-RSRCPEPD-----QFSCFGQQECIPA 908
                  |:.....:.||:...    ..|. ||..|..: |..||...     .|:||...|....
  Fly   502 ------KLPPPTPSPTASPTA----PPYV-LPNTPSPDPREECPGSCIVSLLSFTCFKNAEMTDL 555

  Fly   909 ARWCDNVVDCSDGSDESACTCADRVDEERLCDGYEDC---------PMGEDELGCFGCESLAYSC 964
            .| |..       |.:..|....::.|::......|.         |:|..:  .:..::..||.
  Fly   556 FR-CKR-------SGQICCAPKSKILEKQQFQTRNDTAYYPAPPPPPIGPPQ--AYPPQTPPYSY 610

  Fly   965 YENPQDFAKRNRSTISMCYSRLERCDGFMNCLNGRDEEQCSMLVTDVADHMSHGASASEGYLYHN 1029
            ..||..                          .|...:        :|.|  |...........|
  Fly   611 MNNPPP--------------------------QGPPPQ--------MAPH--HPNPYQPPPPAPN 639

  Fly  1030 YRGDWHPVCNNGEKWAALACQMDENSRMDHSASLNVSFQTLTLPGPF--------IEPSLHAG-- 1084
            | .|::||...|     |..|.........:.:     .|.|.|.|.        ::.:|..|  
  Fly   640 Y-ADYYPVSGPG-----LPPQPQPPMTTPPTTT-----TTTTTPRPHVYSKYVCGVKGTLRTGRS 693

  Fly  1085 -----VHFAQACHG------------------RNSHDSLVDHVAYVKCPPMQ-----CGLPSKSS 1121
                 |.:|:|.:|                  ..|::.||...|.|   |:|     .|...:||
  Fly   694 QALSFVSYARAKYGVQRTARQMTSAAGYSPNFNKSNERLVLGSAIV---PIQIHNDKLGDLVESS 755

  Fly  1122 MLEHSKRVR-----RAVSDSKEIV--------------------GDGRIVGGSYTSALQWPFVVA 1161
            .|: |.::|     :|.:|..::|                    ...|:|||......:|.:.||
  Fly   756 SLQ-SNQLRSYHNHQAQADQPDLVYPEYYQQRSLYGLQSNFSGRRRARVVGGEDGENGEWCWQVA 819

  Fly  1162 IYRN-GKFHCGGTIYSDRWIISAAHCVINY---GKYFYEVRAG--LLRRSSYSPATQIQPVSHVV 1220
            :..: .::.||..:...:|:::|||||.|.   |...| ||.|  .|.|...||..|...|:...
  Fly   820 LINSLNQYLCGAALIGTQWVLTAAHCVTNIVRSGDAIY-VRVGDYDLTRKYGSPGAQTLRVATTY 883

  Fly  1221 VHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGPVEHTL---CTVVGWG 1282
            :|..:..:::.||::||:|....:....|..:|||.:|            |.|..   |||.|:|
  Fly   884 IHHNHNSQTLDNDIALLKLHGQAELRDGVCLVCLPARG------------VSHAAGKRCTVTGYG 936

  Fly  1283 AIREKGPSSDPMRQVIVPI--RKKCTDPEDQASEDI--------CAGDPDGGRDACQGDSGGPLF 1337
            .:.|.||....:|:..:||  ..:|....:..:|.|        |||..: |.||||||.||||.
  Fly   937 YMGEAGPIPLRVREAEIPIVSDTECIRKVNAVTEKIFILPASSFCAGGEE-GHDACQGDGGGPLV 1000

  Fly  1338 CRSVSNPDEFY-LAGVVSHGNGCARPQEFGVYTRVTLYLDWL 1378
            |:.    |.|| |||:||.|.||.|....|||.:.:.::.|:
  Fly  1001 CQD----DGFYELAGLVSWGFGCGRQDVPGVYVKTSSFIGWI 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060 9/40 (23%)
Tryp_SPc 1145..1379 CDD:238113 84/254 (33%)
LDLa 1399..1430 CDD:238060
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
masNP_523919.1 CLIP_SPH_mas 55..87 CDD:465746
CLIP_SPH_mas 192..224 CDD:465746 4/31 (13%)
CLIP_SPH_mas 343..374 CDD:465746 7/32 (22%)
CLIP_SPH_mas 457..492 CDD:465746 4/34 (12%)
CLIP_SPH_mas 532..567 CDD:465746 9/42 (21%)
Tryp_SPc 803..1041 CDD:238113 84/254 (33%)
Blue background indicates that the domain is not in the aligned region.

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