DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and CG9294

DIOPT Version :10

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_995920.1 Gene:CG9294 / 37491 FlyBaseID:FBgn0034666 Length:352 Species:Drosophila melanogaster


Alignment Length:251 Identity:99/251 - (39%)
Similarity:137/251 - (54%) Gaps:21/251 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 RIVGGSYTSALQWPFVVAIYRNGKFHCGGTIYSDRWIISAAHCVINYGKYFYEVRAGLLRRSSYS 1208
            :||||..|...|:|::..|....:|:|.|::.:|.::::|||||.........:|.....||..:
  Fly   100 KIVGGQETRVHQYPWMAVILIYNRFYCSGSLINDLYVLTAAHCVEGVPPELITLRFLEHNRSHSN 164

  Fly  1209 PATQIQP-VSHVVVHQAYERRSMRNDLSLLRLLNPLQF-NRWVKPICLPDKGRTTVGDDWIWGPV 1271
            ....||. ||.|.||:.|..||..|||::|||..||.. :..::|||||.:..:          .
  Fly   165 DDIVIQRYVSRVKVHELYNPRSFDNDLAVLRLNQPLDMRHHRLRPICLPVQSYS----------F 219

  Fly  1272 EHTLCTVVGWGAIREKGPSSDPMRQVIVPI--RKKCTD-----PEDQASEDICAG-DPDGGRDAC 1328
            :|.|..|.||||.||.|..:|.:|:|.|.:  :.:|.:     |.......:||| ..:||:|||
  Fly   220 DHELGIVAGWGAQREGGFGTDTLREVDVVVLPQSECRNGTTYRPGQITDNMMCAGYISEGGKDAC 284

  Fly  1329 QGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEMATTP 1384
            .|||||||.......|.::.|||:||.|.||||||..||||||..||.||. :.||
  Fly   285 SGDSGGPLQTTFDEQPGQYQLAGIVSWGVGCARPQSPGVYTRVNQYLRWLG-SNTP 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1145..1379 CDD:238113 96/243 (40%)
LDLa 1399..1430 CDD:238060
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
CG9294NP_995920.1 Tryp_SPc 101..334 CDD:238113 95/242 (39%)
Blue background indicates that the domain is not in the aligned region.

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