DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and tpr

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster


Alignment Length:253 Identity:93/253 - (36%)
Similarity:141/253 - (55%) Gaps:34/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 RIVGGSYTSALQWPFVVAIYRNGKFHCGGTIYSDRWIISAAHCVINYGKYFYEVRAGLL---RRS 1205
            |||||..|...|:|:|..:...|:|:|..::.:|:::::|:|||..:.|....||  ||   |:.
  Fly   126 RIVGGQETEVHQYPWVAMLLYGGRFYCAASLLNDQFLLTASHCVYGFRKERISVR--LLEHDRKM 188

  Fly  1206 SYSPATQIQPVSHVVVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGP 1270
            |:..... :.|:.|:.|..|..|:..||:::::|..|::||..:.|:|:|..||:..|::.|   
  Fly   189 SHMQKID-RKVAEVITHPKYNARNYDNDIAIIKLDEPVEFNEVLHPVCMPTPGRSFKGENGI--- 249

  Fly  1271 VEHTLCTVVGWGAIREKGPSSDPMRQVIVPI------RK-----KCTDPEDQASEDICAGDPDGG 1324
                   |.||||::..||:||.:::|.|||      ||     |.||      ..:|.|..:||
  Fly   250 -------VTGWGALKVGGPTSDTLQEVQVPILSQDECRKSRYGNKITD------NMLCGGYDEGG 301

  Fly  1325 RDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEMAT 1382
            :|:|||||||||.. ..|...|..:|||||.|.|||:....|||.||..|..|::..|
  Fly   302 KDSCQGDSGGPLHI-VASGTREHQIAGVVSWGEGCAKAGYPGVYARVNRYGTWIKNLT 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 91/246 (37%)
Tryp_SPc 1145..1379 CDD:238113 91/247 (37%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
tprNP_611611.1 Tryp_SPc 126..354 CDD:214473 91/247 (37%)
Tryp_SPc 127..356 CDD:238113 91/248 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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