DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ndl and Corin

DIOPT Version :10

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:1370 Identity:274/1370 - (20%)
Similarity:439/1370 - (32%) Gaps:496/1370 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 FDKPQEILRTTE------GPGQ---------RIIRNVTTTSASSEPIVDTENTNSDHVPTTENGL 376
            :.:|:.:  |.|      |.||         .::.::.|..||.  ..|.:..:.|...:.||.:
  Fly   196 YPQPENV--TAEAVVRGSGDGQGGGGAGLQSALLVDIATRPASG--YADADGISDDDRMSLENSV 256

  Fly   377 VFNITTDGPVETTKSTAQRKLSFDWILDGEENVEPEVKSTNTTTTTAATTTTGATSE-------- 433
            .....|..||:.....|.|......:....:      :|:::|..:|..::.|..||        
  Fly   257 FDESLTSTPVKVAGYLAGRYAGLSHMAKRAQ------RSSSSTVDSAYGSSLGGHSERFASSSTS 315

  Fly   434 --------TIIVTTELPKITFDWIIDGREVVEPQETTTEVTGTTERLRKMPFDWIIDGEEVVEPQ 490
                    ::...:.|.:......||.....:|::...|.....:.:.|:              .
  Fly   316 VDFRSRFSSVDTQSSLDEKPLSSSIDSPLARDPRDAYRERAVLNDAMHKL--------------N 366

  Fly   491 ENVTTTTIATTVAVSTTEINERIHNSTAYPT-----KPKPVKFDWIIDGGESSGEVSTSSTSQPK 550
            .|.|:..:|...|.:....:....:.:..|.     :|.|||..  .:...|.||..:.|:.:|.
  Fly   367 NNNTSLGLALYSASNNNNGSSVASDGSQLPVVPARKQPPPVKGS--SNSSNSIGETQSQSSKEPS 429

  Fly   551 LTTREAISNPESPRSSHPLDNPTSIENMLESFEQHEEQKPILRVLNANESSSETVTDGYERQLWL 615
            ..:..|.::                                    :|..:.|.|::.|       
  Fly   430 SVSASASTS------------------------------------SAASAGSSTISSG------- 451

  Fly   616 KKFEDQARPNQNELIDTFGTALDAKALDKMGPKINPLNGHTWNAADAQILSLCERVA-------L 673
             .....:.|....:..|     || ...:.||...||.       .|.:....|..:       |
  Fly   452 -TMSSMSGPCPAVVPPT-----DA-ITKRPGPPEPPLR-------QANVFDPVETGSRGHPPPPL 502

  Fly   674 RMRNKVATMSDGETKEKGETFTASPSVQFTSRAPGGFPVSGETMKASAQFMFNPNFGMPSIPVCF 738
            .:|||:     |..|....|:......|.::.:...:.:|.           :|.:         
  Fly   503 TVRNKL-----GRNKPPPITYPRMQQRQDSTLSSDSYSISS-----------SPGY--------- 542

  Fly   739 YMTPANFRMPMWSNTPTFMGMQGAHFGGSSN-PGAGIFFVP-QQFGPSGNFFGGS-GGSGAGGQG 800
                 |.::   ...|.....||   |..|| ||:.....| ....|: .|.||: ||:|:|.||
  Fly   543 -----NSKL---MEAPLLGSQQG---GRKSNAPGSAQRQTPLMDLAPT-RFLGGAGGGTGSGKQG 595

  Fly   801 -------------------ANIFSKNASP-----------------QKPTNGQQQVYC------- 822
                               ::.||:.:||                 ::..:....:.|       
  Fly   596 PAMPPPRSKINFRQDSTISSDSFSQTSSPGYNPKLMEAPLLPSLSAKRLCSAPAPIVCRQGVQHE 660

  Fly   823 -----------SYMQNQSGQGA----------GQSQTSSQQQQ---------------------- 844
                       |.:...:||.:          |...|.|.|.|                      
  Fly   661 PIEELEPPQTISPLHKAAGQPSSLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNGRLKFRLF 725

  Fly   845 -------------GGQSAFSNANFKMRHANQT--NTAN------------------------QQG 870
                         ||.:|:.||...::..|:|  ||.:                        |..
  Fly   726 QILINAFALLAIAGGLAAYFNAYPTIKFVNKTIINTIHVEDTTSFGKNPAPGTCLPIIVRFCQGP 790

  Fly   871 QI-----IYASYAG--------------------------------------------------- 879
            ||     ::.:|.|                                                   
  Fly   791 QIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTL 855

  Fly   880 ------------------LPQ-------------------QPIQERSRC---PEPDQFSCFGQQE 904
                              ||:                   ..::|..|.   |:.|.|.| .|..
  Fly   856 CTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVREVMRAATHPKCDGFQC-DQNR 919

  Fly   905 CIPAARWCDNVVDCSDGSDESACTCADRVDEERLCDGYEDCPMGEDELGCFGCESLAYSCYENPQ 969
            |:|....||..:||.|.:||:.|               |.|  |.||:.|..             
  Fly   920 CLPQEYVCDGHLDCMDQADEAKC---------------ERC--GPDEIYCGD------------- 954

  Fly   970 DFAKRNRSTISMCYSRLERCDGFMNCLNGRDEEQCSMLVTDVADHMSHGASASEGYLYHNYRGDW 1034
                      |.|......|||.::|..|:||..|..|.....|   .|....|  :|...:..|
  Fly   955 ----------SQCIGTKHICDGIIDCPYGQDERNCLRLSERNGD---VGTGVLE--VYRIGQRQW 1004

  Fly  1035 HPVCNNGEKWAALACQMDENSRMDHSASLNVSFQTLTLPGPFIEPSLHAGVHFAQACHGRNSHDS 1099
            .|.|  .:.|..........|.:.:||....|..|.....|.: .:::......:....|.|  :
  Fly  1005 MPAC--VKNWDRAVSPSAVCSILGYSAVNATSVLTQLTHRPLL-ATVNVSTDIWKMYAKRKS--T 1064

  Fly  1100 LVDHVAYVK-----------CPPMQCGLPSKSSMLEHSKRVRRAVSDSKEIVGDGRIVGGSYTSA 1153
            |:...|..|           |...:||            ||:|.......     ||:||:..|.
  Fly  1065 LMQEFANCKKTEDYPMADLTCSNYECG------------RVKRGRHKPSR-----RIIGGTQASP 1112

  Fly  1154 LQWPFVVAIYRNGK--FHCGGTIYSDRWIISAAHCVINYGKYFYE---VRAGLLRRSSYSPATQI 1213
            ..|||:.||....:  |:|.|.:.||:|:::|:|||.||.....|   ::.|:.||:|::.:.|.
  Fly  1113 GNWPFLAAILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQK 1177

  Fly  1214 QPVSHVVVHQAYERR-SMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGPVEH--TL 1275
            ..|..|:.|..|... :..||::|.:|...:.|:..:.|:|||......:          |  ||
  Fly  1178 VKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPSVRNL----------HPGTL 1232

  Fly  1276 CTVVGWGAIREKGPSSD---PMRQVIVPI--RKKCTDPEDQ--ASED-ICAGDPDGGRDACQGDS 1332
            |||:|||...:|.|.|.   .:.:|.|||  |.:|.:..|.  .||. :|||..|||:|||||||
  Fly  1233 CTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGFDDGGKDACQGDS 1297

  Fly  1333 GGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEMATTPRLLP----KLQPL 1393
            ||||.|......:.:::.|:||.|..||.|:..|||..|..|:.|::........|    ::...
  Fly  1298 GGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQIAKHSRPIKEDRVNKY 1362

  Fly  1394 QLCPG 1398
            .|.||
  Fly  1363 DLHPG 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060 14/38 (37%)
Tryp_SPc 1145..1379 CDD:238113 92/249 (37%)
LDLa 1399..1430 CDD:238060 274/1370 (20%)
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 7/115 (6%)
LDLa 911..942 CDD:238060 13/31 (42%)
LDLa 945..979 CDD:238060 14/58 (24%)
SR 980..>1034 CDD:214555 12/60 (20%)
Tryp_SPc 1104..1346 CDD:238113 92/251 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.