DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ndl and CG1632

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster


Alignment Length:641 Identity:139/641 - (21%)
Similarity:211/641 - (32%) Gaps:235/641 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1588 TIPTSTEDLKKLTDLVTEFIESTT-----FETTMEVETTT-----------------LSLTSTDA 1630
            |:..::..:|:.|.|:.|.|.|::     .|||..|.|||                 :....|..
  Fly   339 TVDVASLSIKETTGLIEEPIMSSSPLGGHDETTEPVVTTTPAPPRRCSPLELSYCRQVGYNITTY 403

  Fly  1631 PKLVTTEGVKETTTTEDTTTISSIVTLTTTPLATISTTILTTEKH-----VAVTTLAPTTTTESA 1690
            |.|:.....::  ..||......:|               ..|.|     .....|.|       
  Fly   404 PNLLGHASYEQ--LAEDVIVFRELV---------------DGECHREAYDFVCRLLQP------- 444

  Fly  1691 KTTTTHSSSTHSEKDQIQIPNKFVCKKMSQIVDIMMRCDRKV--------DCE---DGTDELDCT 1744
             ...||.|.......||       |::..:  ..|..|..::        |||   :.|....|.
  Fly   445 -PCDTHGSDLQPTPGQI-------CREYCE--SFMAGCGGRLPQRFRQFFDCERFPESTGTQSCH 499

  Fly  1745 CKDYLKGSLKG-----LICDGKADCEDLTDEQNCVECQSNEFRCPLSKTCLPLSSRCDNKVDCKF 1804
            .|.:....::.     .:|||.|||.||:||::|..|..|...|...:.|:|..:|||.|.||..
  Fly   500 QKPHCVSDMQSNVQSPRLCDGYADCPDLSDERSCAFCSPNALYCGRGRACVPRKARCDGKADCPD 564

  Fly  1805 KEDEKDCFALTNGHDVHFDVHQ-QP------KFSSTG--IFSRNGHGVWRVVCAHETGYHEHQAK 1860
            ..|||||.::.   .:..|:.| :|      :|.|.|  :||..  ||...:||...   |..||
  Fly   565 GADEKDCLSIA---PLAADLLQPEPLVPYLSRFHSAGYAVFSEK--GVVGKLCAEGL---EGDAK 621

  Fly  1861 ------TADAVCALLGFNGAHYF---NSSEFVTQH--EMQPITPELKGGRNRMSAQIHSMVGDNV 1914
                  .::::|..||:.....|   |.:|.:..:  .:.|..||:...|..             
  Fly   622 LVVRQTVSESLCKSLGYESVEIFDVQNDTERLNDYVRVLDPHAPEISFIRTH------------- 673

  Fly  1915 QFTENEVIIPELGHPSASRPEKDRLLPRKCVGIYVECNPYSNKTTPLKTFSAGQVVKEKPIEQVP 1979
                                     .||:.| :||.|.                           
  Fly   674 -------------------------CPRRQV-LYVGCG--------------------------- 685

  Fly  1980 VLSPTIETHNTPNVHFKPQIPAMVVNKKDEILDRLDKLIKSKKNKTILVNEQLHEAIEEL----H 2040
                              ::...|                    ::.|.|.:.|.::.::    .
  Fly   686 ------------------ELRCGV--------------------QSALFNAKQHLSLPKMSAPGD 712

  Fly  2041 WPWLADVYMNGDLWCIGVLIDKHWVMVHESCLSGIDLETHYVSVLLGGGKTKRSAHRSNHEQIRR 2105
            ||||..::......|.|.||.:.||:..|.|..|....|....|    |..:.|| ::...|.||
  Fly   713 WPWLVALFREDIHVCDGTLITQDWVLTTEGCFQGQPRATWMAIV----GAVRLSA-KAPWTQRRR 772

  Fly  2106 VDCFEGVPKSNV-----LLLHLERPVRFTHHVLPTFLPDSSH---------QNQSH 2147
            :   .|:.||.|     .|:.||.||.::.||.|..|||:..         |.:||
  Fly   773 I---IGMIKSPVEGSTAALVRLETPVSYSDHVRPICLPDALQRRLLQQPPAQRRSH 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473
Tryp_SPc 1145..1379 CDD:238113
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131 2/11 (18%)
LDLa 1710..1743 CDD:238060 7/43 (16%)
LDLa 1776..1811 CDD:238060 14/34 (41%)
DUF1986 2041..2158 CDD:286432 39/121 (32%)
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
CG1632NP_001245577.1 SEA 232..327 CDD:279699
CRD_FZ 384..502 CDD:143549 23/151 (15%)
PRKCSH-like <503..>582 CDD:193472 28/81 (35%)
LDLa 536..571 CDD:238060 14/34 (41%)
Tryp_SPc 708..>809 CDD:304450 35/108 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.