DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and Prss22

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:NP_001100454.1 Gene:Prss22 / 302971 RGDID:1310880 Length:307 Species:Rattus norvegicus


Alignment Length:254 Identity:91/254 - (35%)
Similarity:139/254 - (54%) Gaps:34/254 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 RIVGGSYTSALQWPFVVAIYRNGKFHCGGTIYSDRWIISAAHCV-INYGKYF-YEVRAGLLRRSS 1206
            |:|||..::..|||::|:|.:||..||.|::.::||::|||||. .|..|.. |.|..|..:..:
  Rat    49 RVVGGEDSADAQWPWIVSILKNGSHHCAGSLLTNRWVVSAAHCFSSNMDKPSPYSVLLGAWKLGN 113

  Fly  1207 YSPATQIQPVSHVVVHQAYERR-SMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGP 1270
            ..|.:|...::.|:.|..|.|: ....|::|:||..|:||:..:.||||||..        :..|
  Rat   114 PGPRSQKVGIASVLPHPRYSRKEGTHADIALVRLERPIQFSERILPICLPDSS--------VHLP 170

  Fly  1271 VEHTLCTVVGWGAIREKGPSSDP--MRQVIVPIRKKCTDPE------------DQASED-ICAGD 1320
             .:|.|.:.|||:|::..|...|  ::::.|||    .|||            :..:|| :|||.
  Rat   171 -PNTNCWIAGWGSIQDGVPLPRPQTLQKLKVPI----IDPELCKSLYWRGAGQEAITEDMLCAGY 230

  Fly  1321 PDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLE 1379
            .:|.||||.|||||||.|:.   .|.:.|.|::|.|.|||.....||||.:..:..|::
  Rat   231 LEGKRDACLGDSGGPLMCQV---DDHWLLTGIISWGEGCAERNRPGVYTSLLAHRPWVQ 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 90/250 (36%)
Tryp_SPc 1145..1379 CDD:238113 90/251 (36%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
Prss22NP_001100454.1 Tryp_SPc 49..285 CDD:214473 90/251 (36%)
Tryp_SPc 50..288 CDD:238113 90/253 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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