DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and Hpn

DIOPT Version :10

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:381 Identity:111/381 - (29%)
Similarity:171/381 - (44%) Gaps:73/381 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1032 GDWHPVCN--NGEKWAALAC-QMDENSRMDHSASLNVSFQTLTLPGPFIEPSLHAGVHFAQACHG 1093
            |.|..:|:  :..:.|.|.| :|.....:.|| .|:|..........|.... ..|:..||    
  Rat   112 GTWRLLCSSRSNARVAGLGCEEMGFLRALAHS-ELDVRTAGANGTSGFFCVD-EGGLPLAQ---- 170

  Fly  1094 RNSHDSLVDHVAYVKCPP--------MQCGLPSKSSMLEHSKRVRRAVSDSKEIVGDGRIVGGSY 1150
                 .|:|.::...||.        ..||              ||.:...       |||||..
  Rat   171 -----RLLDVISVCDCPRGRFLTATCQDCG--------------RRKLPVD-------RIVGGQD 209

  Fly  1151 TSALQWPFVVAIYRNGKFHCGGTIYSDRWIISAAHCVINYGKYF--YEVRAGLLRRSSYSPATQI 1213
            :|..:||:.|::..:|...|||::.|..|:::||||.....:..  :.|.||.:.|:| ..|.|:
  Rat   210 SSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTS-PHAVQL 273

  Fly  1214 QPVSHVVVHQAY--------ERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGRTTVGDDWIWGP 1270
             .|..|:.|..|        :..|  ||::|:.|.:.|....:::|:|||..|:..         
  Rat   274 -GVQAVIYHGGYLPFRDPTIDENS--NDIALVHLSSSLPLTEYIQPVCLPAAGQAL--------- 326

  Fly  1271 VEHTLCTVVGWGAIREKGPSSDPMRQVIVPI--RKKCTDPEDQASE----DICAGDPDGGRDACQ 1329
            |:..:|||.|||..:..|..:..:::..|||  .:.|..|:...::    ..|||.|:||.||||
  Rat   327 VDGKVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQ 391

  Fly  1330 GDSGGPLFCRS-VSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEMATTP 1384
            ||||||..|.. :|....:.|.|:||.|.|||..::.||||:|..:.:|:..|..|
  Rat   392 GDSGGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIKP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1145..1379 CDD:238113 85/250 (34%)
LDLa 1399..1430 CDD:238060
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736 23/112 (21%)
Tryp_SPc 204..441 CDD:238113 84/249 (34%)
Blue background indicates that the domain is not in the aligned region.

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