DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and tmprss2.4

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:XP_031752391.1 Gene:tmprss2.4 / 105946686 XenbaseID:XB-GENE-22065955 Length:571 Species:Xenopus tropicalis


Alignment Length:627 Identity:134/627 - (21%)
Similarity:190/627 - (30%) Gaps:238/627 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1291 SDPMRQVIVPIRKKCTDPEDQASEDIC-----AGDPDGGRDACQGDSGGPLFCRSVSNPDEFYL- 1349
            :||:...::|    || |:.|.:...|     ||.|.|                    |..:.| 
 Frog    64 TDPLYDKVMP----CT-PQMQPAPPPCSTQVPAGPPKG--------------------PFRWSLR 103

  Fly  1350 ------AGVVSHGNGCARPQEFGVYTRVTLYLDW--LEMATTPRLLPKLQPLQLCPGFICVWGGK 1406
                  .|.||          ......|.:.|.|  :....:|...|  .|.|:    .|.:.. 
 Frog   104 KKILVPVGAVS----------ISALVIVVVVLSWYFVTKNQSPSTSP--S
PCQM----YCSYSA- 151

  Fly  1407 RCIAKRQRCDRNVDCLGGEDEVGCTYNFLPDMVGGVRQNISTTTESDYHPVKESEEKSKMREVIP 1471
            :||...|.|:...||..|:||..|.             .::||..:...|               
 Frog   152 QCIYSNQICNGVQDCAYGDDERNCV-------------TLTTTRTTTVTP--------------- 188

  Fly  1472 IDDEDLKAEQDEEDLLKSTTSLGQTETTQGPM------------DLSFAEQITSTTSDDLSITDE 1524
                             .||:...|.||..|:            ...::.||.......|...||
 Frog   189 -----------------RTTTPTTTSTTSSPICKLHCLSVFYYDTCVYSNQICDGIRQCLYGDDE 236

  Fly  1525 TTSTDFTVSDSATSPSTLLPTTTNPSTWLPSTNIETSTFSFTTTESEASTKQETLPTTVAQTTTI 1589
            ....            ||.||||...|                            |.|...|||.
 Frog   237 QNCV------------TLTPTTTTTVT----------------------------PRTTTATTTS 261

  Fly  1590 PTSTEDLKKLTDLVTEFIESTTFETTM-------------EVETTTLSLT-STDAPKLVTTEGVK 1640
            .||:...|..  .::.|...|...|..             |:...||:.| :|.|....||...:
 Frog   262 TTSSPICKLY--CISVFYYYTCVSTNQICDGIQQCLYGDDELNCVTLTTTRTTTATTRTTTATTR 324

  Fly  1641 ETTTTEDTTTISSIVTLTTTPLATISTTILTT-------------EKHVAVTTLAPTTTTESAKT 1692
            .||.|..:||.:.|..|..|.|....|.|.|.             ::...||....||||.:.:|
 Frog   325 TTTATTTSTTSAPICKLYCTSLFYYYTCISTNQICDGIQQCLYGDDELNCVTLTTTTTTTATTRT 389

  Fly  1693 TTTHSS------------------STHSEKDQIQ----------------IPNKFVCKKMSQIVD 1723
            ||:.:|                  ||:...|.||                .|.:..|......:.
 Frog   390 TTSTTSVPICKLYCISVFYYDTCISTNQICDGIQQCLYGDDELNCATTTPSPCQMYCSYTYACIR 454

  Fly  1724 IMMRCDRKVDCEDGTDELDC--------TCKDYLKGSLKGL----ICDGKADCEDLTDEQNCVE- 1775
            ....|:|.:||..|.||.:|        ||:.|...:...:    ||:...||....||:||.. 
 Frog   455 AYQICNRVMDCLYGDDERNCATTTLSNPTCQMYCSYTYACIRAYQICNRVMDCLYADDERNCAST 519

  Fly  1776 ------CQSNEFRCPLSKTCLPLSSRCDNKVDCKFKEDEKDC 1811
                  ||   ..|..:.||:.....|:..:||.:.:||::|
 Frog   520 TLSNPTCQ---MYCSYTYTCIRAYQICNGVMDCLYGDDERNC 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 19/97 (20%)
Tryp_SPc 1145..1379 CDD:238113 20/101 (20%)
LDLa 1399..1430 CDD:238060 10/30 (33%)
Metaviral_G 1448..1600 CDD:118131 29/163 (18%)
LDLa 1710..1743 CDD:238060 9/32 (28%)
LDLa 1776..1811 CDD:238060 10/34 (29%)
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
tmprss2.4XP_031752391.1 PHA03247 <29..141 CDD:223021 22/113 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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