DRSC/TRiP Functional Genomics Resources

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Protein Alignment ndl and LOC100497505

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:XP_002940490.1 Gene:LOC100497505 / 100497505 -ID:- Length:308 Species:Xenopus tropicalis


Alignment Length:262 Identity:74/262 - (28%)
Similarity:116/262 - (44%) Gaps:37/262 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1143 GRIVGGSYTSALQWPFVVAIY---RNGKFH---CGGTIYSDRWIISAAHCVINYGK----YFYEV 1197
            ||||.|:......||:.|::.   |.||.:   ||||:....||::|||| ...||    ..:.:
 Frog    49 GRIVSGNEVRPYSWPWQVSLQVRPRGGKKYVHVCGGTLIHKSWILTAAHC-FQKGKAEDAANWRI 112

  Fly  1198 RAGLLRRSSYSPATQIQPVSHVVVHQAYERRSMRN---DLSLLRLLNPLQFNRWVKPICLPDKGR 1259
            ..|....:......::..|..:..|:.:....:.:   |::|::....:....::...|||.|..
 Frog   113 VVGKHNLNRTEATEKVYSVKRIYRHERFSYPQLNDLDYDIALVKPAEDIITTHFIHYACLPKKEM 177

  Fly  1260 TTVGDDWIWGPVEHTLCTVVGWGAIREKGPS---SDPMRQVIVPI--RKKCTDPE---DQASED- 1315
            ......:.|         |.|||..|....:   |:.:.|..:||  .|.|...:   |:..|. 
 Frog   178 AMHPGHFCW---------VTGWGDTRGGQGNVTLSEVLNQARLPIIDTKTCRHKKFWGDRIRESM 233

  Fly  1316 ICAG--DPDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGN-GCARPQEFGVYTRVTLYLDW 1377
            ||||  :..|...||||||||||.|:......|.:  |:||.|. ||....:..|:|:.:.|:.|
 Frog   234 ICAGFRNVGGPPAACQGDSGGPLVCQDGRGRWEVH--GIVSFGPVGCTVENKPSVFTKTSTYIPW 296

  Fly  1378 LE 1379
            :|
 Frog   297 IE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 71/257 (28%)
Tryp_SPc 1145..1379 CDD:238113 71/258 (28%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
LOC100497505XP_002940490.1 Tryp_SPc 51..300 CDD:238113 72/260 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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