DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ndl and si:dkey-16l2.17

DIOPT Version :9

Sequence 1:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster
Sequence 2:XP_001341498.1 Gene:si:dkey-16l2.17 / 100001520 ZFINID:ZDB-GENE-141212-262 Length:305 Species:Danio rerio


Alignment Length:264 Identity:90/264 - (34%)
Similarity:132/264 - (50%) Gaps:42/264 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1144 RIVGGSYTSALQWPFVVAIYRNGKFH-CGGTIYSDRWIISAAHCVINYGKY-FYEVRAGLLRRSS 1206
            |||||...|...||:.|.|......| |||:|.:..|::|||||..|..:. .|.:..|....:.
Zfish    31 RIVGGVEASPGSWPWQVDIQMGSNGHVCGGSIIAKNWVLSAAHCFPNPSEVSAYTLYMGRHLLNG 95

  Fly  1207 YSPATQIQPVSHVVVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLP------DKGRTTVGDD 1265
            |:...::..|..||:.:.|.......|::|::|..|:.:...::|:|||      :.|       
Zfish    96 YNQFEKVSYVQRVVIPEGYTDPQGGRDVALVQLRAPVSWTDRIQPVCLPFADFQFNSG------- 153

  Fly  1266 WIWGPVEHTLCTVVGWGAIREKGPS---SDPMRQVIVPI--RKKC----------TDPEDQASED 1315
                    |||.|.|||. :::|.|   :..:|:|.|||  :..|          :...|..|:.
Zfish   154 --------TLCYVTGWGH-KQEGVSLTGAAALREVEVPIIDQSSCQFMYQILSSDSSTVDILSDM 209

  Fly  1316 ICAGDPDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTRVTLYLDWLEM 1380
            ||||..:||:|:|||||||||.| .|.| ..:..|||||.|.|||:....|:|:||:.: :.|..
Zfish   210 ICAGYKEGGKDSCQGDSGGPLVC-PVGN-GTWIQAGVVSFGLGCAQKNRPGIYSRVSSF-EKLIR 271

  Fly  1381 ATTP 1384
            .|.|
Zfish   272 TTVP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 87/255 (34%)
Tryp_SPc 1145..1379 CDD:238113 86/256 (34%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
si:dkey-16l2.17XP_001341498.1 Tryp_SPc 32..273 CDD:238113 87/259 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_112858
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.