DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bulli and rmc1

DIOPT Version :10

Sequence 1:NP_648047.2 Gene:Bulli / 38734 FlyBaseID:FBgn0035703 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001349475.1 Gene:rmc1 / 494078 ZFINID:ZDB-GENE-041212-46 Length:654 Species:Danio rerio


Alignment Length:650 Identity:241/650 - (37%)
Similarity:391/650 - (60%) Gaps:31/650 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NGIHYIELTPNPIRFDAVSQLTNVFFDDSNKQIFAVRSGGATGVVVKGPGSPDDVVISFCMSDRG 69
            |..:|:||:.||::|:..|.:.|||||::|||:||||||||||||||||  .|...::|.|.|: 
Zfish     2 NDEYYLELSENPVQFENASSVNNVFFDEANKQVFAVRSGGATGVVVKGP--DDKSSVAFRMDDK- 63

  Fly    70 GAIRSIKFSPDNQILAVQRKENSVEFICFQGDQPLLQDIITHQVKT---LIHGFVWVHNREVALI 131
            |.::.||||..|:||||||...||:||.|..|.|.|:  .:|:.||   .|.||.|.:..|:..:
Zfish    64 GEVKCIKFSLGNKILAVQRTTKSVDFINFIPDYPHLE--FSHECKTKNASILGFCWTNWNEIVFV 126

  Fly   132 SNTGVEVYTVVPEKRQVRSVKSLSIGIKWFAWCCDANVALLCTS-EGNSLIPVLVKQKVITKLPK 195
            ::.|:|.|.|:|:||.::.:||.||.:.|:.:|.:..|.||.|: :||.|.|...|...::|:.|
Zfish   127 TDQGIEFYQVLPDKRTLKLLKSQSINVNWYIYCPETAVLLLSTTVQGNVLQPFAFKTATMSKMSK 191

  Fly   196 VDLGNPS------RDVQESKVTLGQVYGVLAVLILQSNS-TTGLMEVEVHLLNGP--GLAPRKCH 251
            .::..|:      ..:.|..:.:..:|..|.|:.|:.:| ||.....||.|.:.|  |.. ::.:
Zfish   192 FEIELPAVPKPAKLSLSERDIAVATIYDQLYVMYLKHHSRTTNSPGAEVVLYHLPREGTC-KRTN 255

  Fly   252 VLRLSLLGRFAINTVDNLIVVHHQASGTSLLFDISLPGEVINEITYHTPITPGRSIKPFGLKL-- 314
            ||||:..|:||||.||||:|||||::.|||::||.| .|:...:..|.|:.|.|||.||.:.|  
Zfish   256 VLRLNTTGKFAINVVDNLVVVHHQSTQTSLIYDIKL-RELDGNVNVHQPVLPARSINPFKIPLTG 319

  Fly   315 PSLSPDGQILQCELYSTHWVLFQPNIVIDAKLGCMWFLNLCIEPLCQLISDRIRLTEFLLQRSNG 379
            |:.:|....|.|||||:.|.:|||:|:|.|..|.:|:|.:.::|...|:.|:.:|.:|||:|.:.
Zfish   320 PAAAPSQAPLPCELYSSSWSVFQPDIIISASEGFLWYLQVKLQPTLNLLQDKGKLMDFLLRRRDC 384

  Fly   380 KQMLLKVIGQLVDDQYKGTLLPVLETIFSRINKIYASWVQLELQNQTAQPSN-VKTTTLKQSTPP 443
            |.::|.|..|::....||. |.|:.|:|.::|::|..::..|.....|..|. .:::..|:....
Zfish   385 KMVILSVCSQMLIGGDKGN-LSVVATVFDKLNQVYKEYLDAEQAYTAAMESGPSRSSAYKRPVRT 448

  Fly   444 IVLIEQLDM----VQIF--QRIARRPYTESILMLYLQSLNKFNIAAQEELSKMIISELISNRSFD 502
            ..:|:|.||    :..|  ::..:..:..:::|.|::|||:|.|..|..|.:::|..|:.:..|.
Zfish   449 QAVIDQSDMYTHVLSDFTEKKEVKHKFIIAVVMEYIRSLNQFQIPVQHYLYELVIKTLVQHNLFY 513

  Fly   503 TLRRLVSYSMLLESKSVACFLLSHSNVDTAISQVAIDMLGRIE-AHEIIIEVMLGQGKVIDALRL 566
            .|.:.:.|.:|.:||.:||.|||..:......|:::|||.|:. |::.|:||:|.:.:|:.|||.
Zfish   514 MLHQFLQYHVLTDSKPLACLLLSLESTYPPAYQLSLDMLKRLSTANDEIVEVLLSKQQVLGALRF 578

  Fly   567 AKNSMGLEKVPARKFLEAAHKTKDDLIFHSVYRFFQMRNLKLYETLSFPKAEQCTEFIQHYNNTF 631
            .::..|.:...|||||:||.:|.|.::|::::|||:.||::|.....|...|.|.|.:.::...|
Zfish   579 IRSVGGHDNASARKFLDAARQTNDTMLFYTIFRFFETRNMRLRGNPGFNPGEHCEEHVSYFKQVF 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BulliNP_648047.2 Mic1 461..617 CDD:429257 54/156 (35%)
rmc1NP_001349475.1 Mic1 472..629 CDD:429257 54/156 (35%)

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