DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8270 and RMC1

DIOPT Version :9

Sequence 1:NP_648047.2 Gene:CG8270 / 38734 FlyBaseID:FBgn0035703 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_037458.3 Gene:RMC1 / 29919 HGNCID:24326 Length:657 Species:Homo sapiens


Alignment Length:663 Identity:242/663 - (36%)
Similarity:392/663 - (59%) Gaps:40/663 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HYIELTPNPIRFDAVSQLTNVFFDDSNKQIFAVRSGGATGVVVKGPGSPDDVVISFCMSDRGGAI 72
            :|:||...|::|:..:.:..||||::|||:||||||||||||||||  .|...|||.|.|: |.:
Human     6 YYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGP--DDRNPISFRMDDK-GEV 67

  Fly    73 RSIKFSPDNQILAVQRKENSVEFICFQGDQPLLQDIITHQVKTL---IHGFVWVHNREVALISNT 134
            :.||||.:|:||||||...:|:|..|..|...|:  .|.:.||.   |.||.|..:.|:..|::.
Human    68 KCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLE--YTQECKTKNANILGFCWTSSTEIVFITDQ 130

  Fly   135 GVEVYTVVPEKRQVRSVKSLSIGIKWFAWCCDANVALLCTSE-GNSLIPVLVKQKVITKLPKVDL 198
            |:|.|.|:||||.::.:||.::.:.|:.:|.::.|.||.|:. .|.|.|...:...::||||.::
Human   131 GIEFYQVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEI 195

  Fly   199 GNPSR------DVQESKVTLGQVYGVLAVLILQ-----SNSTTGLMEVEVHLLNGPGLAPRKCHV 252
            ..|:.      .:.|..:.:..:||.|.||.|:     ||||..  ||.::.|...| |.:|.|:
Human   196 ELPAAPKSTKPSLSERDIAMATIYGQLYVLFLRHHSRTSNSTGA--EVVLYHLPREG-ACKKMHI 257

  Fly   253 LRLSLLGRFAINTVDNLIVVHHQASGTSLLFDISLPGEVINEITYHTPITPGRSIKPFGLKLPSL 317
            |:|:..|:||:|.||||:|||||.:.||::|||.|.||....:|:|.|:.|.|||:|:  ::|..
Human   258 LKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPY--QIPIT 320

  Fly   318 SPDGQILQ----CELYSTHWVLFQPNIVIDAKLGCMWFLNLCIEPLCQLISDRIRLTEFLLQRSN 378
            .|.....|    |:|||:.|::|||:|:|.|..|.:|.|.:.:||:..|:.|:.||.:|||||..
Human   321 GPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKE 385

  Fly   379 GKQMLLKVIGQLVDDQYKGTLLPVLETIFSRINKIYASWVQLELQNQTAQPSNVKTTT--LKQST 441
            .|.::|.|..|::.:..:.: |||:.|:|.::|..|..::..|.....|..:....::  ||:..
Human   386 CKMVILSVCSQMLSESDRAS-LPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPV 449

  Fly   442 PPIVLIEQLD----MVQIFQRIARRP--YTESILMLYLQSLNKFNIAAQEELSKMIISELISNRS 500
            ....:::|.|    ::..|......|  :..::||.|::|||:|.||.|..|.:::|..|:.:..
Human   450 RTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNL 514

  Fly   501 FDTLRRLVSYSMLLESKSVACFLLSHSNVDTAISQVAIDMLGRIE-AHEIIIEVMLGQGKVIDAL 564
            |..|.:.:.|.:|.:||.:||.|||..:......|:::|||.|:. |::.|:||:|.:.:|:.||
Human   515 FYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAAL 579

  Fly   565 RLAKNSMGLEKVPARKFLEAAHKTKDDLIFHSVYRFFQMRNLKLYETLSFPKAEQCTEFIQHYNN 629
            |..:...|.:.:.|||||:||.:|:|:::|::::|||:.||.:|..:.:|...|.|.|.:..:..
Human   580 RFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPGEHCEEHVAFFKQ 644

  Fly   630 TFPADNPTRQPVS 642
            .| .|....:|.:
Human   645 IF-GDQALMRPTT 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8270NP_648047.2 Mic1 461..616 CDD:284457 57/157 (36%)
RMC1NP_037458.3 Mic1 475..631 CDD:284457 57/155 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160012
Domainoid 1 1.000 300 1.000 Domainoid score I1426
eggNOG 1 0.900 - - E1_KOG2377
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8341
Inparanoid 1 1.050 408 1.000 Inparanoid score I1889
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59981
OrthoDB 1 1.010 - - D191938at33208
OrthoFinder 1 1.000 - - FOG0006644
OrthoInspector 1 1.000 - - oto90645
orthoMCL 1 0.900 - - OOG6_104796
Panther 1 1.100 - - LDO PTHR12897
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4196
SonicParanoid 1 1.000 - - X5651
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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