DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bulli and Rmc1

DIOPT Version :10

Sequence 1:NP_648047.2 Gene:Bulli / 38734 FlyBaseID:FBgn0035703 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001009638.1 Gene:Rmc1 / 291784 RGDID:1311805 Length:657 Species:Rattus norvegicus


Alignment Length:659 Identity:242/659 - (36%)
Similarity:386/659 - (58%) Gaps:53/659 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HYIELTPNPIRFDAVSQLTNVFFDDSNKQIFAVRSGGATGVVVKGPGSPDDVVISFCMSDRGGAI 72
            :|:||...|::|:..:.:..||||::|||:||||||||||||||||  .|...|||.|.|| |.:
  Rat     6 YYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGP--DDRNPISFRMDDR-GEV 67

  Fly    73 RSIKFSPDNQILAVQRKENSVEFICFQGDQPLLQDIITHQVKTL---IHGFVWVHNREVALISNT 134
            :.||||.:|:||||||...:|:|..|..|...|:  .|.:.||.   |.||.|..:.|:..|::.
  Rat    68 KCIKFSLENKILAVQRTSKAVDFCNFIPDNSQLE--YTQECKTKNANILGFCWTSSTEIVFITDQ 130

  Fly   135 GVEVYTVVPEKRQVRSVKSLSIGIKWFAWCCDANVALLCTSE-GNSLIPVLVKQKVITKLPKVDL 198
            |:|.|.|:||||.::.:||.:|.:.|..:|.:::|.||.|:. .|.|.|...|...::||||.::
  Rat   131 GIEFYQVLPEKRSLKLLKSHNINVNWHMYCPESSVILLSTTVLENVLQPFYFKAGTMSKLPKFEI 195

  Fly   199 GNPSR------DVQESKVTLGQVYGVLAVLILQ-----SNSTTGLMEVEVHLLNGPGLAPRKCHV 252
            ..|:.      .:.|..:.:..:||.|.||.|:     ||||..  ||.::.|...| |.:|.|:
  Rat   196 ELPAAPKSTKLSLSERDIAMATIYGQLYVLFLRHHSRTSNSTGA--EVVLYHLPREG-ACKKMHI 257

  Fly   253 LRLSLLGRFAINTVDNLIVVHHQASGTSLLFDISLPGEVINEITYHTPITPGRSIKPFGLKL--P 315
            |:|:..|:||:|.||||:|||||.:.||::|||.|.||....:|:|.|:.|.|||:|:.:.|  |
  Rat   258 LKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIRLRGEFDGTVTFHHPVLPARSIQPYQIPLAGP 322

  Fly   316 SLSPDGQILQCELYSTHWVLFQPNIVIDAKLGCMWFLNLCIEPLCQLISDRIRLTEFLLQRSNGK 380
            :...:...:.|:|||:.|::|||:|:|.|..|.:|.|.:.::|:..|:.|:.||.:|||||...|
  Rat   323 AAVTNQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLQPIVNLLPDKGRLMDFLLQRKECK 387

  Fly   381 QMLLKVIGQLVDDQYKGTLLPVLETIFSRINKIYASWVQLELQNQTAQPSNVKTTTLKQSTPPI- 444
            .::|.|..|::.:..:.| |||:.|:|.::|..|..::..|.....|..:.     ..:|.||: 
  Rat   388 AVVLSVCSQMLSESDRAT-LPVIATVFDKLNHEYKKYLDAEQSYTMAVEAG-----QSRSNPPLK 446

  Fly   445 ------VLIEQLDMVQIFQRIARRPYTE----------SILMLYLQSLNKFNIAAQEELSKMIIS 493
                  .:::|.|   ::..:. .|:.|          ::||.|::|||:|.|..|..|.:::|.
  Rat   447 RPVRTQAVVDQSD---VYTHVL-SPFVENKETPPKFVIAVLMEYIRSLNQFQIPVQHYLHELVIK 507

  Fly   494 ELISNRSFDTLRRLVSYSMLLESKSVACFLLSHSNVDTAISQVAIDMLGRIE-AHEIIIEVMLGQ 557
            .|:.:..|..|.:.:.|.:|.:||.:||.|||..:......|:::|||.|:. |::.|:||:|.:
  Rat   508 TLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSK 572

  Fly   558 GKVIDALRLAKNSMGLEKVPARKFLEAAHKTKDDLIFHSVYRFFQMRNLKLYETLSFPKAEQCTE 622
            .:|:.|||..:...|.:.:.|||||:||.:|.|.::|::::|||:.||.:|....:|...|.|.|
  Rat   573 HQVLAALRFIRGIGGHDNISARKFLDAAKQTDDVMLFYTIFRFFEQRNQRLRGNPNFTPGEHCEE 637

  Fly   623 FIQHYNNTF 631
            .:..:...|
  Rat   638 HVAFFKQAF 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BulliNP_648047.2 Mic1 461..617 CDD:429257 57/166 (34%)
Rmc1NP_001009638.1 Mic1 475..632 CDD:429257 55/156 (35%)

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