DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8270 and Y50D4A.4

DIOPT Version :9

Sequence 1:NP_648047.2 Gene:CG8270 / 38734 FlyBaseID:FBgn0035703 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_503392.3 Gene:Y50D4A.4 / 178616 WormBaseID:WBGene00021738 Length:628 Species:Caenorhabditis elegans


Alignment Length:616 Identity:156/616 - (25%)
Similarity:282/616 - (45%) Gaps:78/616 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GIHYIELTPNPIRFDAVSQLTNVFFDDSNKQIFAVRSGGATGVVVKGPGSPDDVVISFCMSDRGG 70
            |..:|...|:....|  ..:|..|||.|:::|..:|:.||.|:..|  ...:|.:::....|||.
 Worm     5 GASFIPFEPDRSSHD--GNITRNFFDCSSQRICTMRNNGALGLTSK--SLKNDKIMNVRTKDRGE 65

  Fly    71 AIRSIKFSPDNQILAVQRKENSVEFICFQGDQP--LLQDIITHQVKTLIHGFVWVHNREVALISN 133
            . .::|||||.::.|:||...:.:.:..:..:.  .|:..:..:.|..:....||.|.::.|::|
 Worm    66 P-STVKFSPDGRLCAMQRTPTTADVVFLEKTETSLCLELTVNTKSKEPLLAVEWVTNNQLLLVNN 129

  Fly   134 TGVEVYTVVPEKRQVRSVKSLSIGIKWFAWCCDANVALLCTSEGNS-LIPVLVKQKVITKLP--K 195
            ...|:..:..:|:..:.:|:.::...|..:...:.:.|:...:..| |.|.:|.....|::.  :
 Worm   130 HSAELLYINEDKKSSKLLKATNVNAAWAIYYAPSQLLLIANGQSCSYLQPFVVTHSQFTRMKGFE 194

  Fly   196 VDLGN--PSRDVQESKVTLGQVYGVLAVLILQ---SNSTT-GLMEVEVHLLNGPGLAPRKCHVLR 254
            ||.|.  ...:..|....:..:||.:.||:.:   .|:|. .|.|:......||...    |.|.
 Worm   195 VDFGGSISKENFLEKDAAIATIYGRVYVLVFKYSNRNATVLDLYELPFDAATGPSFK----HSLI 255

  Fly   255 LSLLGRFAINTVDNLIVVHHQASGTSLLFDISLPGEVINEITYHTPITPGRSIKPFGLKLPSLSP 319
            |...|...|:.:|||:|||||||..||:|||.:.             :|.:|..|..:......|
 Worm   256 LGFNGGCGIHVIDNLVVVHHQASQKSLIFDIRVS-------------SPSKSHSPLVVTTIESHP 307

  Fly   320 DGQILQCELYSTHWVLFQPNIVIDAKLGCMWFLNLCIEPLCQLISDRIRLTEFLLQRSNGKQMLL 384
            ..|.... ||:..|..|.|:||||:..|.|:.:.|..|.....|:|:..:.|:|.:|||.|::.:
 Worm   308 QHQPPPA-LYTNFWFTFLPDIVIDSSGGVMYSIRLKNEHAQLEIADKQTMLEYLARRSNEKKLFV 371

  Fly   385 KVIGQLVDDQYKGTLLPVLET---IFSRINKIYASWVQLELQNQTAQPS--NVKTTTLK------ 438
            .            |||..|:.   ...:|.|::|....:..::..::.|  |...::.|      
 Worm   372 T------------TLLACLKARALSLRQIRKVFAMLTGVTGKSSASENSVENGSGSSQKPVLDCE 424

  Fly   439 ------------QSTPPIVLIEQLDMVQIFQRIARRPYTESILMLYLQSLNKFNIAAQEELSKMI 491
                        ||:..|.|.|::.:.:        .|..:|::.||:||....|..:..|.:|:
 Worm   425 KYASLAVTQQEMQSSVLIPLREEVSLPE--------SYVANIMLQYLRSLFDAEITPEAYLIEMV 481

  Fly   492 ISELISNRSFDTLRRLVSYSMLLESKSVACFLLSHSNVDTAISQVAIDMLGRIEAHEIIIEVMLG 556
            :..|........|:::|:|.::.:||.:|..|||:....:.:.|..:|:|.|.:|.:.|:||||.
 Worm   482 VETLAEAGEMSKLQQIVTYRVINDSKPLAFLLLSYEARCSTLFQSGVDILARNKASDEIVEVMLE 546

  Fly   557 QGKVIDALRLAKNSMGLEKVPARKFLEAAHK 587
            :.:::||.|.. :...|......|.:|||::
 Worm   547 KKQIVDAFRFI-DVRNLNDALIPKVVEAANQ 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8270NP_648047.2 Mic1 461..616 CDD:284457 37/127 (29%)
Y50D4A.4NP_503392.3 Mic1 451..606 CDD:369179 37/135 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167525
Domainoid 1 1.000 129 1.000 Domainoid score I3288
eggNOG 1 0.900 - - E1_KOG2377
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8341
Inparanoid 1 1.050 172 1.000 Inparanoid score I2744
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59981
OrthoDB 1 1.010 - - D191938at33208
OrthoFinder 1 1.000 - - FOG0006644
OrthoInspector 1 1.000 - - oto20363
orthoMCL 1 0.900 - - OOG6_104796
Panther 1 1.100 - - LDO PTHR12897
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4196
SonicParanoid 1 1.000 - - X5651
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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