DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10147 and znf1004

DIOPT Version :9

Sequence 1:NP_001261477.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001107936.1 Gene:znf1004 / 799653 ZFINID:ZDB-GENE-080219-20 Length:934 Species:Danio rerio


Alignment Length:393 Identity:113/393 - (28%)
Similarity:161/393 - (40%) Gaps:80/393 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KPVYEVDEDEEEELELEELLLEPPEMIICDTNLSAQNTPIVAEQAPPTLVFHTFTENVQQPPET- 156
            ||....||:.|:|.:..|            .:.|..:.|:.|::.|..|...||.  :::..:. 
Zfish    11 KPCTTEDEETEKETDFIE------------DDKSEDDKPVNADKMPHLLTEGTFL--IKRKDKNC 61

  Fly   157 -----------EKKALE--------EPPLTTYKCDLCADEFREEKRLILHKKEHQGHMLYHCTEP 202
                       .|.:||        |.|   |.|..|...||:...|.||...|.|...|.||: 
Zfish    62 FTCSQCGKSLGRKSSLEIHMRIHTGERP---YTCTQCGKSFRQSSSLTLHMTIHTGERPYTCTQ- 122

  Fly   203 GCEEAFNRFENLRQHELEHSEVGMR-FVCEEEGCNRMYRHKASLKYHQSKAHDIGKPLKTHMCEF 266
             |.::|....||..|.|.|:  |.: ..|::  |.:.:...|.||.| .:.|...||   :.|..
Zfish   123 -CGKSFMNSSNLNNHRLIHT--GKKTHKCDQ--CGKSFLRAADLKAH-FRVHTKVKP---YSCSV 178

  Fly   267 CGRVFKTGSALSQHRFTHGDQLVLPYACELPECSMRFYSTEKLKIHMMRHQGIKNFSCPYCGLKK 331
            ||:.|.|.|.|..|:..|..  |..|.|.  ||...|.|...||.|.|.|.|.|.:.|.:|..:.
Zfish   179 CGKSFSTESHLRGHQKIHTG--VKEYMCF--ECEKTFISAHHLKRHQMIHTGEKPYKCSHCDKRF 239

  Fly   332 TTKNELRLHINYHTLERTWSCKDCPKVCNSSTSLKKH-----------------------IRAIH 373
            ......:.|...||.|:::.|..|.|..|...|.|.|                       .:.||
Zfish   240 NRLESQKSHETIHTGEKSYKCSHCDKRFNRLESQKSHETIHTGEKSYKCSHCDKRFRQLRHQKIH 304

  Fly   374 EK----ARDYACSYCEKKFATTDTRKYHEMTHTGEKNFECHVCGKKFIQPSALRTHRKVHESGDN 434
            |:    .:.|.||:|||.|....:.|.|||.|||||.::|..|.|:|.|...::.|.::| :|:.
Zfish   305 ERIHTGTKPYKCSHCEKTFGNLGSVKTHEMIHTGEKPYKCSHCDKRFSQLGTMKLHERIH-TGEK 368

  Fly   435 QQT 437
            ..|
Zfish   369 AYT 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10147NP_001261477.1 zf-AD 7..80 CDD:214871
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
zf-C2H2_8 199..287 CDD:292531 28/88 (32%)
C2H2 Zn finger 199..221 CDD:275368 8/21 (38%)
C2H2 Zn finger 230..253 CDD:275368 6/22 (27%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
C2H2 Zn finger 294..316 CDD:275368 9/21 (43%)
C2H2 Zn finger 324..344 CDD:275368 3/19 (16%)
C2H2 Zn finger 352..373 CDD:275368 7/43 (16%)
C2H2 Zn finger 381..401 CDD:275368 10/19 (53%)
C2H2 Zn finger 409..429 CDD:275368 6/19 (32%)
znf1004NP_001107936.1 C2H2 Zn finger 64..84 CDD:275368 3/19 (16%)
zf-H2C2_2 76..101 CDD:290200 8/27 (30%)
COG5048 88..502 CDD:227381 95/302 (31%)
C2H2 Zn finger 92..112 CDD:275368 7/19 (37%)
C2H2 Zn finger 120..140 CDD:275368 8/21 (38%)
C2H2 Zn finger 148..168 CDD:275368 6/22 (27%)
C2H2 Zn finger 176..196 CDD:275368 8/19 (42%)
C2H2 Zn finger 204..224 CDD:275368 9/21 (43%)
zf-H2C2_2 216..241 CDD:290200 9/24 (38%)
C2H2 Zn finger 232..252 CDD:275368 3/19 (16%)
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
C2H2 Zn finger 288..308 CDD:275368 3/19 (16%)
C2H2 Zn finger 316..336 CDD:275368 10/19 (53%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 113/393 (29%)
zf-H2C2_2 384..409 CDD:290200
C2H2 Zn finger 400..420 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
COG5048 480..864 CDD:227381
C2H2 Zn finger 484..504 CDD:275368
zf-H2C2_2 497..521 CDD:290200
C2H2 Zn finger 512..532 CDD:275368
C2H2 Zn finger 540..560 CDD:275368
C2H2 Zn finger 568..588 CDD:275368
C2H2 Zn finger 596..616 CDD:275368
C2H2 Zn finger 624..644 CDD:275368
C2H2 Zn finger 652..672 CDD:275368
C2H2 Zn finger 680..700 CDD:275368
C2H2 Zn finger 708..728 CDD:275368
C2H2 Zn finger 736..756 CDD:275368
C2H2 Zn finger 764..784 CDD:275368
zf-H2C2_2 776..801 CDD:290200
C2H2 Zn finger 792..812 CDD:275368
C2H2 Zn finger 820..840 CDD:275368
C2H2 Zn finger 848..868 CDD:275368
C2H2 Zn finger 876..896 CDD:275368
zf-H2C2_2 888..913 CDD:290200
C2H2 Zn finger 904..924 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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