DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10147 and Zim1

DIOPT Version :9

Sequence 1:NP_001261477.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_035899.4 Gene:Zim1 / 22776 MGIID:1341879 Length:579 Species:Mus musculus


Alignment Length:288 Identity:94/288 - (32%)
Similarity:124/288 - (43%) Gaps:23/288 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 ETEKKALEEPPLTTYKCDLCADEFREEKRLILHKKEHQGHMLYHCTEPGCEEAFNRFENLRQHEL 219
            |.|:....|.|   :|||.|...||.....:.|.:.|.|...|.|.|  |.:|||....|..|..
Mouse   286 EHERIHTGEKP---HKCDTCGKSFRHLSYFLTHYRIHTGVRPYKCKE--CGKAFNSSSTLNNHCR 345

  Fly   220 EHSEVGMR-FVCEEEGCNRMYRHKASLKYHQSKAHDIGKPLKTHMCEFCGRVFKTGSALSQHRFT 283
            .||  |.: |.|:|  |.:.::....|..|| :.|...||.|   |..|.:.|...|:|.:|:..
Mouse   346 IHS--GEKPFKCDE--CGKTFKQSTKLTRHQ-RIHTGEKPYK---CGECNKCFGRSSSLREHKRI 402

  Fly   284 H-GDQLVLPYACELPECSMRFYSTEKLKIHMMRHQGIKNFSCPYCGLKKTTKNELRLHINYHTLE 347
            | |::   ||.|::  |...|.....|..|...|..:|.:.|..||......:.|..|...|...
Mouse   403 HTGEK---PYCCQV--CGKTFRVNSHLSEHQRLHLKVKPYKCDKCGKHFRNSSYLTEHKQIHVPG 462

  Fly   348 RTWSCKDCPKVCNSSTSLKKHIRAIHEKARDYACSYCEKKFATTDTRKYHEMTHTGEKNFECHVC 412
            ....|.:|.||.....:|.||.:. ||....|.|..|.|.|....:.:.||..|.|||.|.||.|
Mouse   463 ARVDCPECGKVFACKVALLKHQKR-HEANSRYRCKGCGKTFRCKSSIQRHERLHAGEKPFVCHKC 526

  Fly   413 GKKFIQPSALRTHRKVHESGDNQQTACA 440
            .|.|...:.|..|.|:| ||| :...||
Mouse   527 DKGFTDKTTLNNHLKIH-SGD-RPDPCA 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10147NP_001261477.1 zf-AD 7..80 CDD:214871
C2H2 Zn finger 171..191 CDD:275368 6/19 (32%)
zf-C2H2_8 199..287 CDD:292531 30/89 (34%)
C2H2 Zn finger 199..221 CDD:275368 8/21 (38%)
C2H2 Zn finger 230..253 CDD:275368 6/22 (27%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 294..316 CDD:275368 5/21 (24%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
C2H2 Zn finger 409..429 CDD:275368 8/19 (42%)
Zim1NP_035899.4 KRAB 50..105 CDD:214630
PRK13335 137..>269 CDD:139494
COG5048 <226..427 CDD:227381 50/158 (32%)
C2H2 Zn finger 271..291 CDD:275368 2/4 (50%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..347 CDD:275368 8/21 (38%)
C2H2 Zn finger 355..375 CDD:275368 6/22 (27%)
C2H2 Zn finger 383..403 CDD:275368 6/19 (32%)
C2H2 Zn finger 411..431 CDD:275368 5/21 (24%)
zf-C2H2 437..459 CDD:333835 5/21 (24%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 7/20 (35%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
zf-C2H2 521..543 CDD:333835 9/21 (43%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.