DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10147 and hinf-1

DIOPT Version :9

Sequence 1:NP_001261477.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:259 Identity:69/259 - (26%)
Similarity:107/259 - (41%) Gaps:40/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 MLYHCTEPGCEEAFNRFENLRQHELEHSE-VG---------------MRFVCEEEGCNRMYRHKA 243
            ||.:|....|...||....|..|...|.: ||               :.|.|:...|.::...||
 Worm   243 MLLNCQWEDCGMPFNSLTELFDHVGHHIDGVGDVDRIQQNFSNGDKKVVFPCKWTACTQVADSKA 307

  Fly   244 SLKYHQSKAHDIGKPLKTHMCEFCGRVFKTGSALSQH--RFT---HGDQLVLPYACELPECSMRF 303
            :|:.|  ..|..|:  |...|.||.|.|.....|..|  |.|   ...::..||.|:|  |..||
 Worm   308 NLRRH--ARHHSGE--KVLACPFCARFFSRRDKLYDHCLRRTILMKNPEMEDPYLCKL--CQKRF 366

  Fly   304 YSTEKLKIHMMRHQGIKNFSCPYCGLKKTTKNELRLHI--NYHTLERTWSCKDCPKVCNSSTSLK 366
            .:.:.|.:|:.||  :.:.:||.|.|....:.||..|:  .:....:.:.|..|.|:..:.:.|.
 Worm   367 GTEKALCMHVTRH--LVSLTCPLCSLGLGCRAELHRHLMTKHSRRSKDFKCDTCSKLFFTESELN 429

  Fly   367 KHIRAIHEKARDYACSYCEKKFATTDTRKYHEMTHTGEKNFE-----CHVCGKKFIQPSALRTH 425
            :|  |::.....|:|.:|.:||........|...|  ::||.     ||:|.:.:....||..|
 Worm   430 RH--AVYHSDVMYSCKHCPEKFKWKKQLMKHMKEH--DENFNPSPYTCHLCDRTYTTGFALGRH 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10147NP_001261477.1 zf-AD 7..80 CDD:214871
C2H2 Zn finger 171..191 CDD:275368
zf-C2H2_8 199..287 CDD:292531 28/108 (26%)
C2H2 Zn finger 199..221 CDD:275368 6/21 (29%)
C2H2 Zn finger 230..253 CDD:275368 6/22 (27%)
C2H2 Zn finger 264..284 CDD:275368 9/24 (38%)
C2H2 Zn finger 294..316 CDD:275368 7/21 (33%)
C2H2 Zn finger 324..344 CDD:275368 7/21 (33%)
C2H2 Zn finger 352..373 CDD:275368 6/20 (30%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
C2H2 Zn finger 409..429 CDD:275368 6/17 (35%)
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 5/18 (28%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 359..379 CDD:275368 7/21 (33%)
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 415..435 CDD:275368 6/21 (29%)
C2H2 Zn finger 442..462 CDD:275368 5/19 (26%)
C2H2 Zn finger 473..494 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.