DRSC/TRiP Functional Genomics Resources

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Protein Alignment Best2 and best-21

DIOPT Version :10

Sequence 1:NP_729159.2 Gene:Best2 / 38727 FlyBaseID:FBgn0035696 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_502846.2 Gene:best-21 / 190674 WormBaseID:WBGene00013520 Length:395 Species:Caenorhabditis elegans


Alignment Length:378 Identity:135/378 - (35%)
Similarity:217/378 - (57%) Gaps:29/378 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVSYAGEVPNGSSFGCFWKILWKWRGSVYKLIWRELVAYLCLYYTINVIYRFGLTESQQAIFKK 65
            |||:|..||.:.:|| .|.|:|..||||::|.:..||..::..:..:.::||:.:||.||..|:.
 Worm     1 MTVNYNQEVSSVNSF-TFVKLLMTWRGSIWKSVRWELTMWVIAFAVVQMVYRYLMTEDQQKFFEY 64

  Fly    66 IRLYFGQQSESIPMSFVLGFYVNLVVKRWWEQYRLLPWPDTLALFISAAIPNSNGGVNNETGRLM 130
            ..::...:...||::|:|||:|.:||.||...:..:.:.:.:||.:...:..:     :...:::
 Worm    65 SAIHLNVRLIHIPLTFMLGFFVTIVVDRWRSVFTNIGFIENVALSVGTLVAGT-----DHAAKVL 124

  Fly   131 RRNIMRYMVLAYVITLQRISLRVKRRFPTTQHLVDAGLMHESEMKIFEALNQKSPM-SKYWMPLV 194
            ||.|:||:||:.|:.|:.||:||:|||||.:.||..|.::..|:   |.:.:...| :|||:|..
 Worm   125 RRTIIRYLVLSQVLVLRDISMRVRRRFPTMESLVSGGFLYRDEL---ERMYKCDTMYNKYWLPTH 186

  Fly   195 WATNIINRAR-KDGLIASDHIVQTILVELSDIRRRLGGLIGYDTVCVPLVYTQVVTLVLYTYFIA 258
            ||..::::|. :...:.|...:.::|:.:.:.|:.:..|..||.|.:|:.|.|||.|.:..|||.
 Worm   187 WANQLVHKAMFETKNVDSVQSMNSVLMNIKEFRQSMEMLTKYDWVPIPIAYPQVVFLAVRVYFII 251

  Fly   259 ALLGRQMLPNVLDRSGREDPDLFFPLFTVLQFVFYVGWLKVAEVLINPFGEDDDDIELNWLIDRH 323
            .|:.||.|.:......:.    ..|:.|:|||||:|||:||||.|:||.||||||.|.||||||:
 Worm   252 CLVSRQYLLSAPPTEAQS----IVPIMTILQFVFFVGWMKVAEALLNPLGEDDDDFECNWLIDRN 312

  Fly   324 IKAAYMIVDEMHEEHPELLRDQ--------YWECVVPKD----LPYTVA-SEH 363
            :.....|||..|:..|.|..|:        || |...|:    .|..|| |:|
 Worm   313 MSTGIEIVDTCHDSCPPLKLDEPDDESGTMYW-CHPTKNGSQAPPSAVAISQH 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Best2NP_729159.2 Bestrophin 13..322 CDD:460047 111/310 (36%)
best-21NP_502846.2 Bestrophin 8..311 CDD:460047 113/315 (36%)

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