DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ABCB29

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_196011.1 Gene:ABCB29 / 830269 AraportID:AT5G03910 Length:634 Species:Arabidopsis thaliana


Alignment Length:627 Identity:181/627 - (28%)
Similarity:275/627 - (43%) Gaps:111/627 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IGWLFFGFIMC-CIKALTLPAVVIIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREE 108
            :|||      | |:..::|..:|.....|||.|...|... |......|.|.|            
plant    78 LGWL------CSCVSVVSLSQIVPRLGSFTSNLNANAASL-TKLKGECLVLAG------------ 123

  Fly   109 NNEALYDDSISYGILLTIASVVMF-----------ISGIFSVDVFNMVALRQVTRMRIKLF---S 159
                           |.:|.||.:           ::.::.:.||   |.|:|....::.|   :
plant   124 ---------------LVLAKVVAYYLQQAFLWEAALNTVYKIRVF---AYRRVLERELEFFEGGN 170

  Fly   160 SVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSY-------- 216
            .:...||.:...|.                   :.:|...:|.::..::..||..|.        
plant   171 GISSGDIAYRITAE-------------------ASEVADTIYALLNTVVPSAIQISVMTAHMIVA 216

  Fly   217 GWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQ 281
            ...|||..:..||.|.||..|:.....|::.:.|.:.|.......|:|.:|..|.:...|.||..
plant   217 SPALTLVSAMVIPSVALLIAYLGDRLRKISRKAQIASAQLSTYLNEVLPAILFVKANNAEISESV 281

  Fly   282 RYENFLVPAR-------KASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYT 339
            |::.|   ||       |..:.|.....:...:....|.:.|.||      :|:...::.:....
plant   282 RFQRF---ARADLDERFKKKKMKSLIPQIVQVMYLGSLSIFCVGA------VILAGSSLSSSAIV 337

  Fly   340 PAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLLNYGLRGD 404
            ..:..:||.     .|.:...................||.:..|.||:  :.....:....:.|:
plant   338 SFVASLAFL-----IDPVQDLGKAYNELKQGEPAIERLFDLTSLESKV--IERPEAIQLEKVAGE 395

  Fly   405 VEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDL 469
            ||..|:.|:|......::. |||:.|:||:||||||.||.||:|.::||.|.|:|..||:::|.:
plant   396 VELCDISFKYDENMLPVLD-GLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYEPSSGSIIIDKI 459

  Fly   470 DIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYG--KPGATQKEIEAAATQAGAHEFITNLPES 532
            ||:...::.||.::.:|.|:..||.||||.||.|.  ..|...|.:|.||..|.|.|||.||||.
plant   460 DIKDIKLESLRKHVGLVSQDTTLFSGTIADNIGYRDLTTGIDMKRVELAAKTANADEFIRNLPEG 524

  Fly   533 YRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIV 597
            |.:.:|.|||.||||||||:||||||.|...||:|||||||||..||..|::||:...:..|.||
plant   525 YNTGVGPRGSSLSGGQKQRLAIARALYQKSSILILDEATSALDSLSELLVREALERVMQDHTVIV 589

  Fly   598 VSHRLSAIRGADKIVFIHDGKVLE------EGSHDDLMALEG 633
            ::|||..:..|.::..:..||:.|      ..:|.|.:...|
plant   590 IAHRLETVMMAQRVFLVERGKLKELNRSSLLSTHKDSLTSAG 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 165/553 (30%)
MdlB 711..1299 CDD:440747
ABCB29NP_196011.1 MdlB 57..613 CDD:440747 177/607 (29%)
Blue background indicates that the domain is not in the aligned region.

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