DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and ABCB20

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_191092.1 Gene:ABCB20 / 824698 AraportID:AT3G55320 Length:1408 Species:Arabidopsis thaliana


Alignment Length:1405 Identity:421/1405 - (29%)
Similarity:695/1405 - (49%) Gaps:175/1405 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSSSEGKSQEEAPMAEGLE-PTEPIAFLKLF----RFSTYGEIGWLFFGFIMCCIKALTLPAVVI 67
            |:::..::.||....:.|| |...:.|.:||    ||.      |:.  .|:..:.|......:|
plant    47 TAAALAEADEEMDDQDELEPPPAAVPFSQLFACADRFD------WVL--MIVGSVAAAAHGTALI 103

  Fly    68 IYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMF 132
            :|..:.:.:|| .:.|                  :|.|.::.:|..:|..:...:.:...:..:|
plant   104 VYLHYFAKIVD-VLAF------------------SNDSSQQRSEHQFDRLVQLSLTIVYIAGGVF 149

  Fly   133 ISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHD-LASKQNFTQSMVDDVEKIRDGISEKV 196
            |||...|..:.:...||...:|.|....::.||:.:.| ..:..:....::.||..|:..:||||
plant   150 ISGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKV 214

  Fly   197 GHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAE 261
            |::::.:..||..:.|.|...|::.|...:..|.::........|..:|....|::||.|..:||
plant   215 GNYIHNMATFISGLVIGFVNCWEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAE 279

  Fly   262 EILSSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNL 326
            :.:|.|||:.:|..|......|...|....:.........||.......:...|||...|.|...
plant   280 QAISYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRFF 344

  Fly   327 IIDDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLS 391
                  |.|.......::.|.|.:|:....:.:.|....||...|..|..||::|..:|.:  .:
plant   345 ------VHNGRANGGEIIAALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMITRSSSV--AN 401

  Fly   392 TDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRF 456
            .:|.:| ..::|::||::|:|.|.||||:.:..|..:.:.|.:.|||||.:|.|||:.:.|::||
plant   402 QEGAVL-ASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERF 465

  Fly   457 YDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAG 521
            |||..|.||||..:|:...::||||.|.:|.|||.|...:|.:||:||: .||..:||.||..|.
plant   466 YDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGR-DATLDQIEEAAKNAH 529

  Fly   522 AHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQAL 586
            ||.||::|.:.|.:.:|..|..::..||.:::||||::.||.||||||.|..||:::|:.||:||
plant   530 AHTFISSLEKGYETQVGRAGLAMTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERIVQEAL 594

  Fly   587 DLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDI-----NM 646
            ||...||:||:::.|||.|:.||.|..:.:|:::|.|:||:|:.|.|.|..:::..:.     .|
plant   595 DLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLKCEEATKLPRRM 659

  Fly   647 PDEVEKEDSIEDTKQKSLA-----------------------LF---EKSFET-------SPLNF 678
            |....||.::.:.::.|.|                       :|   |..|:|       ||.:.
plant   660 PVRNYKESAVFEVERDSSAGCGVQEPSSPKMIKSPSLQRGSGVFRPQELCFDTEESPKAHSPASE 724

  Fly   679 EKGQ--------------------------------------KNSVQFEEPIIKALIKD-----T 700
            :.|:                                      .|..:.|.|:...|..|     :
plant   725 KTGEDGMSLDCADKEPTIKRQDSFEMRLPHLPKVDVQCPQQKSNGSEPESPVSPLLTSDPKNERS 789

  Fly   701 NAQSAEAPPEKPNFFR---------------TFSRILQLAKQEWCYLILGTISAVAVGFLYP--- 747
            ::|:...|...|:..:               :|.|:.||:..||.|.:||::.|...|...|   
plant   790 HSQTFSRPLSSPDDTKANGKASKDAQHKESPSFWRLAQLSFPEWLYAVLGSLGAAIFGSFNPLLA 854

  Fly   748 -AFAVIFGEFYAALAEKDPEDALRRTAVLSW----ACLGLAFLTGLVCFLQTYLFNYAGIWLTTR 807
             ..|::..|:|.:      :....|..|..|    ||:|:  :|.:..|||.:.|...|..:|.|
plant   855 YVIALVVTEYYKS------KGGHLREEVDKWCLIIACMGI--VTVVANFLQHFYFGIMGEKMTER 911

  Fly   808 MRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMY 872
            :|.|.|:||:..||||||||.||...||.||:.:|..::.|....||..||.....|.::.:.:.
plant   912 VRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVALLIGLL 976

  Fly   873 YNWKLALLCLANCPIIVGSVILEAKMMSNAVVREKQVIEEACRIATESITNIRTVAGLRREADVI 937
            ..|:|||:.||..||:..|.|.:...::......:::..:|..:..:::.||.||........|:
plant   977 LGWRLALVALATLPILTLSAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVM 1041

  Fly   938 REYTEEIQRVEVLIRQKLRWRGVLNSTMQASAFFAY---AVALCYGGVLVSEGQLPFQDIIKVSE 999
            ..|..::||:   :||.......:......|.|..:   |:.|....:.|:.|.:.....|....
plant  1042 ELYRMQLQRI---LRQSYLHGMAIGFAFGFSQFLLFACNALLLWCTALSVNRGYMKLSTAITEYM 1103

  Fly  1000 TLLYGSMMLAQSLAFTPAF---SAALIAGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEGVRY 1061
            ...:.:..|.:.....|..   ..:||:   :|:|:||.|.|:..    .|:..|..|::..:..
plant  1104 VFSFATFALVEPFGLAPYILKRRKSLIS---VFEIVDRVPTIEPD----DNSALKPPNVYGSIEL 1161

  Fly  1062 RGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQ 1126
            :.:.|.|||||:..:|:...|::..|||||:||.||.||||.:.|::|||||..|.:.:|..|::
plant  1162 KNVDFCYPTRPEILVLSNFSLKISGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVLLDGRDLK 1226

  Fly  1127 HDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYD 1191
            . ..|..:|:.:|:|.|||.:|..:|.|||.|.  |.:.|..|:..||:.||||.||.|||:|||
plant  1227 L-YNLRWLRSHMGLVQQEPIIFSTTIRENIIYA--RHNASEAEMKEAARIANAHHFISSLPHGYD 1288

  Fly  1192 TRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSG-RTCIVI 1255
            |.:|.||.:|:.||||||||||.:::|..|:|:|||:|:::.:|.::||:||||...| :|.|:|
plant  1289 THIGMRGVELTPGQKQRIAIARVVLKNAPIILIDEASSSIESESSRVVQEALDTLIMGNKTTILI 1353

  Fly  1256 AHRLSTVQNADVICVIQNGQVVEQGNHMQLISQGGIYAKL 1295
            |||.:.:::.|.|.|:..|::||:|.|..|.::.|:|.:|
plant  1354 AHRAAMMRHVDNIVVLNGGRIVEEGTHDSLAAKNGLYVRL 1393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 173/523 (33%)
MdlB 711..1299 CDD:440747 205/615 (33%)
ABCB20NP_191092.1 MdlB 85..646 CDD:440747 185/591 (31%)
MdlB 821..1393 CDD:440747 203/592 (34%)

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