DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and ABCB19

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_189528.1 Gene:ABCB19 / 822519 AraportID:AT3G28860 Length:1252 Species:Arabidopsis thaliana


Alignment Length:1313 Identity:458/1313 - (34%)
Similarity:716/1313 - (54%) Gaps:89/1313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSSSEGKSQEEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIYSEF 72
            |::::.|:   .|.....:..:.:.|.|||.|:...:...:|.|.:...:...::|...:::.:.
plant     4 TNTTDAKT---VPAEAEKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLLFGQM 65

  Fly    73 TSMLVDRAMQFGTSSNVHALPLFGGGKT---LTNASREENNEALYDDSISYGILLTIASVVMFIS 134
            .:                     |.||.   |.....|.:..:||  .:..|:::..:|......
plant    66 VN---------------------GFGKNQMDLHQMVHEVSRYSLY--FVYLGLVVCFSSYAEIAC 107

  Fly   135 GIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDL-ASKQNFTQSMVDDVEKIRDGISEKVGH 198
            .::|.:       |||..:|.|...:|::||:|:.|. |...:...|:..|...::|.||||||:
plant   108 WMYSGE-------RQVAALRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGN 165

  Fly   199 FVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEI 263
            |::.:..|:..:.:.|...|||.|...:.||.:.......|.....:|::.:||||.||.:||:.
plant   166 FIHYLSTFLAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGITSKSRESYANAGVIAEQA 230

  Fly   264 LSSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLII 328
            ::.:|||.|:.||...:..|.:.:....|.....|...||.......:..:|.|..|||....|.
plant   231 IAQVRTVYSYVGESKALNAYSDAIQYTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIR 295

  Fly   329 DDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKI--DPLS 391
            :.:....|.:|      |.|..|||..::.::...|.:|:..:.....|.::|:....|  ||| 
plant   296 NGQTDGGKAFT------AIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQRPTIIQDPL- 353

  Fly   392 TDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRF 456
             |||.|:. :.|::||:||.|.|||||:|::.|..||...:|:|||:||.||.||||.|.|::||
plant   354 -DGKCLDQ-VHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGSGSGKSTVVSLIERF 416

  Fly   457 YDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAG 521
            |||..|.:|||.::|:...:::||..|.:|.|||.||..||.:||.||||.||..|:||||:.|.
plant   417 YDPNSGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYGKPDATMVEVEAAASAAN 481

  Fly   522 AHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQAL 586
            ||.|||.||:.|.:.:||||.|||||||||||||||::::||||||||||||||..||..||:||
plant   482 AHSFITLLPKGYDTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSESIVQEAL 546

  Fly   587 DLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVR------AGDIN 645
            |....||||:||:|||..||..|.|..|..|:|:|.|:|::|:|..|||.:::|      ..|.:
plant   547 DRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYASLIRFQEMVGTRDFS 611

  Fly   646 MPDEVEKEDS--IEDTKQKSLALFEKSFETSPLNFEKGQKNSVQFEEPIIKALIKDTNAQSAEAP 708
            .|.......:  ......|||:|...|......::..|....::        :|.:.........
plant   612 NPSTRRTRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIE--------MISNAETDRKTRA 668

  Fly   709 PEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALAEKDPEDALRRTA 773
            ||  |:   |.|:|:|...||.|.|:|.:.::..||:.|.||::...........|.:...|:|.
plant   669 PE--NY---FYRLLKLNSPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYTDYDSMERKTK 728

  Fly   774 VLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARL 838
            ...:..:|..........:|.|.|:..|..||||:|.|..:|::..||||||::.::...::|||
plant   729 EYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEDEHNSSLIAARL 793

  Fly   839 SGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAV 903
            :.:|.|::.||...:|.::|.:::.::|..||....|:::||.|...|::|.:...:...:....
plant   794 ATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFA 858

  Fly   904 VREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNSTMQAS 968
            ....:...:...||.|.::||||||....::.::..:..|::..:.....:.:..|.|....|.:
plant   859 GDTAKAHAKTSMIAGEGVSNIRTVAAFNAQSKILSLFCHELRVPQKRSLYRSQTSGFLFGLSQLA 923

  Fly   969 AFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALIAGHRLFQILD 1033
            .:.:.|:.|.||..|||:|...|..:|||...|:..:..:|::::..|.......|...:|.:||
plant   924 LYGSEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSVLD 988

  Fly  1034 RKPKIQ------SPMGTIKNTLAKQLNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVAL 1092
            |:.:|.      .|:.||:.          .:.:|.:.|.||:|||..:....:|.:..|.:.||
plant   989 RQTRIDPDDADADPVETIRG----------DIEFRHVDFAYPSRPDVMVFRDFNLRIRAGHSQAL 1043

  Fly  1093 VGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIA 1157
            ||.||.|||:.:.:::|:|||..|.:.||..||:. |.|..:|.|:|:|.|||.||..:|.:|||
plant  1044 VGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIRR-LNLKSLRLKIGLVQQEPALFAATIFDNIA 1107

  Fly  1158 YGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKIL 1222
            ||.:..:.|  |:|.||::||||.||..||.||.|.:|.||.|||||||||||||||:::||.:|
plant  1108 YGKDGATES--EVIDAARAANAHGFISGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKNPTVL 1170

  Fly  1223 LLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLIS 1287
            ||||||||||.:||.::|:||:....|||.:|:||||||::..|.|.|||:|::||||:|.:|:|
plant  1171 LLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVS 1235

  Fly  1288 Q-GGIYAKLHKTQ 1299
            : .|.|::|.:.|
plant  1236 RPEGAYSRLLQLQ 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 447/1230 (36%)
ABC_membrane 108..354 CDD:279056 67/246 (27%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 136/242 (56%)
ABC_membrane 736..1006 CDD:279056 70/269 (26%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 122/240 (51%)
ABCB19NP_189528.1 PTZ00265 17..1247 CDD:240339 454/1294 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 180 1.000 Domainoid score I1042
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.790

Return to query results.
Submit another query.