DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and Abcb8

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:555 Identity:198/555 - (35%)
Similarity:302/555 - (54%) Gaps:49/555 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 YGI--LLTIASVVMFISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMV 182
            ||:  |||...:|:          .:.:..|....||..||||::||||.:.|..........:.
Mouse   184 YGVQGLLTFGYLVL----------LSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLT 238

  Fly   183 DDVEKIRDG----ISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQG 243
            .||::.:..    ||:.:..... |:|.::::::   ...:|||.::...|.::.:...:.....
Mouse   239 TDVQEFKSSFKLVISQGLRSCTQ-VIGSLVSLSM---LSPRLTLMLAVVTPALMGVGTLMGSGLR 299

  Fly   244 KLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRY----ENFLVPARKASQWKGAFSGLS 304
            ||:.:.||..|.|..:|:|.|.::|||.:|..||.|.:||    |:....|.:..:....|.|||
Mouse   300 KLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLS 364

  Fly   305 DAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESF-- 367
            :.....|:    .|..:.|.:|      |..::.....||    ..:|.:..:.|:...|...  
Mouse   365 NIAFNCMV----LGTLFIGGSL------VAGQQLKGGDLM----SFLVASQTVQRSMASLSVLFG 415

  Fly   368 ATARG--CATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRI 430
            ...||  ....:|:.:.| |.:.||:....:.|..:||.:.||:|.|.||.||...|.:...:::
Mouse   416 QVVRGLSAGARVFEYMAL-SPVIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKL 479

  Fly   431 RAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN-IAVVGQEPVLFL 494
            .:|:.|||||.||.||:|...||:|||||..|||.||..|:|..|..|||.. |..:.||||||.
Mouse   480 PSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFA 544

  Fly   495 GTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALI 559
            .||.:||.:||..|:.:|:..||.:|.|||||::.|:.|.:::||||:.||||||||:|||||||
Mouse   545 TTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALI 609

  Fly   560 QNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGS 624
            :.|.:|:|||||||||.:||:.||:|||.||.|||.:|::||||.:|.|..|:.:.:|:|.|.|:
Mouse   610 KQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGT 674

  Fly   625 HDDLMALEGAYYNMVR-----AGDINMPDEVEKED 654
            |::|:...|.|..::|     |...:.|...:.||
Mouse   675 HEELLKKGGLYSELIRRQTLDASLTSTPPAEKPED 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 198/555 (36%)
ABC_membrane 108..354 CDD:279056 60/243 (25%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 122/242 (50%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
Abcb8NP_083296.2 MdlB 116..695 CDD:224055 194/539 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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