DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and abcb9

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001119906.1 Gene:abcb9 / 570148 ZFINID:ZDB-GENE-050517-12 Length:789 Species:Danio rerio


Alignment Length:732 Identity:228/732 - (31%)
Similarity:350/732 - (47%) Gaps:131/732 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AFLKLFRFSTYGEI---GWLFFGFIMCCIKALTLPAVVIIY---------------SEFTSMLVD 78
            |..||...|..|.:   .|....|...|:.|:   .|:|.:               ||.|..|||
Zfish    97 ALAKLLMLSEEGNLMYDPWFLSLFSWTCVAAI---GVMIFWKILSQTPNAVSDREDSEDTERLVD 158

  Fly    79 -------RAMQFGTSSNVHA----------------------------------LPLFGGGKTLT 102
                   ::|:.| ..:.|:                                  :|.: .|:.:.
Zfish   159 ETEDESEKSMKSG-KEHTHSGATIGRLLSYCKKDSSLLSIAFFFLLLSAVCEAFIPYY-TGQAID 221

  Fly   103 NASREENNEALYDDSISYGILLTIASVVM-FISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDI 166
            ....:::.:......|:..:|..::|:.: |..|:|||     ...|...|:|..||.|::.|:|
Zfish   222 GIVIQKSMDHFAKPMITLSVLALVSSIAIGFRGGVFSV-----TFARLNIRLRNLLFRSLMHQEI 281

  Fly   167 GWHDLASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLV 231
            |:.|.....:.|..:..|..::.|.||:.|..|:...|..:......|...|||::......|.:
Zfish   282 GFFDANHTGDITSRLTSDTTQVSDLISQNVNLFLRSFVKAVGIFIFMFGMSWKLSVVTIMGFPYI 346

  Fly   232 ILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRY-----ENFLVPAR 291
            .:::....::..|||...|.:.|.|..:|||.:|::|||.||..|..|...|     |.|::..:
Zfish   347 AVVSKLYGEYYKKLTKEVQTALAQANKVAEETISAMRTVRSFANEDQEGDMYYSRLQEMFVLNKK 411

  Fly   292 KA-----SQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGII 351
            :|     ..|....|.|  |:..::|:        ||.:|:     |.|:.....::....:.:.
Zfish   412 QAIAYACFMWSSYISEL--ALQVAILF--------YGGHLV-----VTNQMSGGTLISFVIYELE 461

  Fly   352 VGADNIARTAPFLESFATAR-------GCATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDVEFQD 409
            :|        ..|||.::..       |.|..:|:.||...|   .:.:|:.....|.|.|||.:
Zfish   462 LG--------EALESISSVYTGLMQGVGAAEKVFEYIDRKPK---HALNGQEAPETLEGQVEFNN 515

  Fly   410 VFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKY 474
            |.|.||||||:.|.:.::..:|.||..||||.||.|||:||.||:.||.|..|.||:|...:..|
Zfish   516 VTFAYPSRPEMDVLKNVSFSLRPGQVTALVGPSGGGKSSCVCLLENFYAPQQGQVLVDGRPVNTY 580

  Fly   475 NIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGE 539
            ..::..|.:|:|.||||||..|:..|||||.|.|..:.:..||..|.||:|||.|.:.|.|.:||
Zfish   581 QHKYYHSKVALVAQEPVLFARTVQMNISYGVPEAPMEAVIRAAINANAHDFITGLSKGYDSGVGE 645

  Fly   540 RGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSA 604
            :|:|||||||||:|||||||::|:||:|||||||||.:||..|||||:...:..|.:|::||||.
Zfish   646 KGTQLSGGQKQRVAIARALIRSPRILILDEATSALDSESEYIVQQALNNLMREHTVLVIAHRLST 710

  Fly   605 IRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVR----AGDINMPD---------EVEKEDSI 656
            :..||.|:.|..|.|:|:|.|.:|||..|.|..:|:    ..:|::.|         |::.||  
Zfish   711 VERADNILVIDKGSVVEQGPHAELMARGGLYCKLVQRQILGTEIDVDDKNPSPAPTWELKTED-- 773

  Fly   657 EDTKQKSLALFEKSFET 673
               |:.:....:..:||
Zfish   774 ---KENAEDCSDTEYET 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 208/648 (32%)
ABC_membrane 108..354 CDD:279056 62/256 (24%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 123/240 (51%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
abcb9NP_001119906.1 3a01208 46..745 CDD:273363 219/683 (32%)
ABC_membrane 199..458 CDD:279056 64/279 (23%)
P-loop_NTPase 500..725 CDD:304359 116/224 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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