DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and Abcb9

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_063928.2 Gene:Abcb9 / 56325 MGIID:1861729 Length:762 Species:Mus musculus


Alignment Length:632 Identity:203/632 - (32%)
Similarity:319/632 - (50%) Gaps:93/632 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 APPEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALA------EKDP 765
            ||.|:.: ..|..::|...|.:..:|:     |.:...:..|....|..:|...|      :|..
Mouse   160 APAEQAS-GATLQKLLSYTKPDVAFLV-----AASFFLIVAALGETFLPYYTGRAIDSIVIQKSM 218

  Fly   766 EDALRRTAVLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNS 830
            :.......|:   || ||..:.|...::..:|......|..|:|...|.::|:||..:||:  |.
Mouse   219 DQFTTAVVVV---CL-LAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDE--NR 277

  Fly   831 VGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMY-YNWKLALLCLANCPIIVGSVIL 894
            .|.|.:||:.:...:...:...::..::.... ::.|.|.|: .:|:|:|:.....|||:     
Mouse   278 TGDLISRLTSDTTMVSDLVSQNINIFLRNTVK-VTGVVVFMFSLSWQLSLVTFMGFPIIM----- 336

  Fly   895 EAKMMSN-------AVVREKQ-VIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLI 951
               |:||       .:.:|.| .:..|...|.|:|:.::||          |.:..|.:..||.:
Mouse   337 ---MVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKTV----------RSFANEEEEAEVFL 388

  Fly   952 RQKLRWRGVLNSTMQASAFFAY------------AVALCYGGVLVSEGQLPFQDIIKVSETLLYG 1004
            | ||:....|| ..:|:|:.:|            ...|.|||.||..||:...::|..   ::| 
Mouse   389 R-KLQQVYKLN-RKEAAAYMSYVWGSGLTLLVVQVSILYYGGHLVISGQMSSGNLIAF---IIY- 447

  Fly  1005 SMMLAQSLAFTPAFSAALIAG----HRLFQILDRKPKIQSPMGTIKNTLAKQLNL----FEG-VR 1060
            ..:|...:....:..:.|:.|    .::|:.:||:|           |:....:|    .|| |.
Mouse   448 EFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQP-----------TMVHDGSLAPDHLEGRVD 501

  Fly  1061 YRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDI 1125
            :..:.|.|.|||..::|..:...:..|:..||||.||.|||:||.:|:.:|....|.:.:|...|
Mouse   502 FENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPI 566

  Fly  1126 ---QHDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLP 1187
               .|..    :...:.:|||||.||.|||.:||:||  ..:|....::.||:.||||.||:.|.
Mouse   567 GAYDHKY----LHRVISLVSQEPVLFARSITDNISYG--LPTVPFEMVVEAAQKANAHGFIMELQ 625

  Fly  1188 NGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTC 1252
            :||.|..|.:|.|||||||||:|:||||||||.:|:|||||||||.:||.|:|||:.......|.
Mouse   626 DGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTV 690

  Fly  1253 IVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQGGIYAKLHKTQ 1299
            ::||||||||:.|.:|.|:..|:||:||.|.||::|||:||||.:.|
Mouse   691 LIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQ 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 203/632 (32%)
ABC_membrane 108..354 CDD:279056
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216
ABC_membrane 736..1006 CDD:279056 69/296 (23%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 115/242 (48%)
Abcb9NP_063928.2 3a01208 44..734 CDD:273363 201/627 (32%)
ABC_membrane 189..451 CDD:279056 68/292 (23%)
ABCC_TAP 489..714 CDD:213215 104/230 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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