DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and ABCB4

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_011514610.3 Gene:ABCB4 / 5244 HGNCID:45 Length:1384 Species:Homo sapiens


Alignment Length:1301 Identity:564/1301 - (43%)
Similarity:787/1301 - (60%) Gaps:62/1301 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVSTSSSEGKSQEEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIY 69
            |:..||.:.:.:.:.        .:.|..|.|||:|.:.:..::..|.||.......||.::|::
Human   112 ELGISSKQKRKKTKT--------VKMIGVLTLFRYSDWQDKLFMSLGTIMAIAHGSGLPLMMIVF 168

  Fly    70 SEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMFIS 134
            .|.|...||.|..|....| .:|.|...||.|   ..|....|.|...:..|:|         ::
Human   169 GEMTDKFVDTAGNFSFPVN-FSLSLLNPGKIL---EEEMTRYAYYYSGLGAGVL---------VA 220

  Fly   135 GIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGHF 199
            ....|..:.:.|.||:.::|.|.|.:::||:|||.|:.........:.||:.||.:||.:|||.|
Human   221 AYIQVSFWTLAAGRQIRKIRQKFFHAILRQEIGWFDINDTTELNTRLTDDISKISEGIGDKVGMF 285

  Fly   200 VYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEIL 264
            ...|..|.....:.|..||||||.:.:..|::.|.....||.....:.:|..:||.||.:|||.|
Human   286 FQAVATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILSAFSDKELAAYAKAGAVAEEAL 350

  Fly   265 SSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIID 329
            .:||||::|||:..|::||:..|..|::....|...:.:|..:...::|.|.|.|||||..|:| 
Human   351 GAIRTVIAFGGQNKELERYQKHLENAKEIGIKKAISANISMGIAFLLIYASYALAFWYGSTLVI- 414

  Fly   330 DRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDG 394
                 :||||....|..||.|::||.::.:.||.:::||.|||.|..:|.:||...|||..|..|
Human   415 -----SKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGAAYVIFDIIDNNPKIDSFSERG 474

  Fly   395 KLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDP 459
            ...: .::|::||.||.|.||||..|.:.:|||:::::||||||||||||||||.|||:||.|||
Human   475 HKPD-SIKGNLEFNDVHFSYPSRANVKILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDP 538

  Fly   460 VFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHE 524
            ..|::.:|..|||.:|:.:||..|.||.||||||..|||:||.||:...|..||:.|..:|.|:|
Human   539 DEGTINIDGQDIRNFNVNYLREIIGVVSQEPVLFSTTIAENICYGRGNVTMDEIKKAVKEANAYE 603

  Fly   525 FITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLA 589
            ||..||:.:.:::||||:||||||||||||||||::|||||||||||||||.:||.:||.|||.|
Human   604 FIMKLPQKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKA 668

  Fly   590 SKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYY---NMVRAGDINMPDEVE 651
            .:||||||::||||.:|.||.|....||.::|:|||.:||..||.|:   ||..:|.....:|.|
Human   669 REGRTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELMKKEGVYFKLVNMQTSGSQIQSEEFE 733

  Fly   652 KEDSIEDTKQKSLALFEKSFETSPLNFEKGQKNSVQFEEPIIKALIKDTNAQSAEAPPEKPNFFR 716
            ..|....|:........:.|..|.   :|..|||...:    |:|..:|:...|..||.      
Human   734 LNDEKAATRMAPNGWKSRLFRHST---QKNLKNSQMCQ----KSLDVETDGLEANVPPV------ 785

  Fly   717 TFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALAEKDPEDALRRTAVLSWACLG 781
            :|.::|:|.|.||.|.::||:.|:|.|.|.|||:|||.|..|.....|.....::..:.|...|.
Human   786 SFLKVLKLNKTEWPYFVVGTVCAIANGGLQPAFSVIFSEIIAIFGPGDDAVKQQKCNIFSLIFLF 850

  Fly   782 LAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEAVDIQ 846
            |..::....|||.:.|..||..||.|:|:|.|.||:.|::.||||..||.||||.||:.:|..:|
Human   851 LGIISFFTFFLQGFTFGKAGEILTRRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQ 915

  Fly   847 GAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVREKQVIE 911
            ||.|..|:.:.|.::|..:.:.::..|.|:|.||.||..|||..|.|:|.|:::....|:|:.:|
Human   916 GATGTRLALIAQNIANLGTGIIISFIYGWQLTLLLLAVVPIIAVSGIVEMKLLAGNAKRDKKELE 980

  Fly   912 EACRIATESITNIRTVAGLRREADVIREYTEEI---QRVEVLIRQKLRWRGVLNSTMQASAFFAY 973
            .|.:||||:|.|||||..|.:|......|.|::   .|..|   ||....|:..|..||..:|:|
Human   981 AAGKIATEAIENIRTVVSLTQERKFESMYVEKLYGPYRNSV---QKAHIYGITFSISQAFMYFSY 1042

  Fly   974 AVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALIAGHRLFQILDRKPKI 1038
            |....:|..|:..|.:.|:|:|.|...:::|::.|..:.:|.|.::.|.::...||.:.:|:|.|
Human  1043 AGCFRFGAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFMLFERQPLI 1107

  Fly  1039 QSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKST 1102
            .|     .:....:.:.||| :.:..:.|.||||.:..:|.||.|||.||||:||||.|||||||
Human  1108 DS-----YSEEGLKPDKFEGNITFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKST 1167

  Fly  1103 CVQLLQRYYDPDEGTIHIDHD----DIQH--DLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDN 1161
            .||||:|:|||..||:.:|..    |.|.  .|.:..:|.:||||||||.||:.|||||||||||
Human  1168 VVQLLERFYDPLAGTVFVDFGFQLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDN 1232

  Fly  1162 RRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDE 1226
            .|.||..||::|||:||.|.||.:||:.|:||:|.:||||||||||||||||||:|.|:||||||
Human  1233 SRVVSQDEIVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALIRQPQILLLDE 1297

  Fly  1227 ATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQGGI 1291
            ||||||.:||::||:|||.|..|||||||||||||:||||:|.|.|||:|.|.|.|.||::|.||
Human  1298 ATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGI 1362

  Fly  1292 Y 1292
            |
Human  1363 Y 1363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 542/1215 (45%)
ABC_membrane 108..354 CDD:279056 81/245 (33%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 142/239 (59%)
ABC_membrane 736..1006 CDD:279056 103/272 (38%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 153/240 (64%)
ABCB4XP_011514610.3 AAA 108..1369 CDD:333001 564/1301 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3116
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136368
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1700
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R932
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.710

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