DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ABCB7

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_728642.2 Gene:ABCB7 / 38193 FlyBaseID:FBgn0035244 Length:743 Species:Drosophila melanogaster


Alignment Length:597 Identity:181/597 - (30%)
Similarity:288/597 - (48%) Gaps:64/597 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LFGGG-KTLTNASREENNEALYDDSISYGILLTIASVVMFISGIFSVD----------VFNMVAL 147
            ||.|. .|:|..:.:...:|          :|:.|:.:|...||....          ||..||.
  Fly   178 LFKGAVDTMTTLNMDTAPDA----------VLSAATALMLGYGIARASAAGFNELRNAVFAKVAH 232

  Fly   148 RQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVA- 211
            ..:.::...:|..:...|:.:|  .:||  |.::...:::...||:..:...|:.:|..|..:| 
  Fly   233 HSIRKIASNVFLHLHNLDLAFH--LNKQ--TGALSKTIDRGSRGINFVLSAMVFNIVPTIFELAL 293

  Fly   212 ISFSYGWKLTLA--------VSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIR 268
            :|...|.|..||        |..|....:.:..:..:|:..:...|.|    |||.|.:.|.:..
  Fly   294 VSSILGVKCGLAFAGVSMGCVGIYAAYTLSVTQWRTQFRVFMNQAENE----AGNKAVDSLINYE 354

  Fly   269 TVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGL----SDAVLKSMLYL---SCAGAFWYGVNL 326
            ||..|..||.|...|...|.....||....:...|    .:|:..|.|.|   ..|.....| |:
  Fly   355 TVKYFNNEKYEAGCYNEVLKKYEAASLKTSSSLALLNFGQNAIFSSALSLIMVLAAKEIAQG-NM 418

  Fly   327 IIDDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLS 391
            .:.|..:.|.......:.:.|.|.:.   ...|.| .|:..|        :|.::::.|.|...:
  Fly   419 TVGDLVMVNALLFQLSIPLGFLGSVY---REVRQA-LLDMRA--------MFTLMNVDSSIQTAA 471

  Fly   392 TDGKLLNYGLRGDVEFQDVFFRY-PSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQR 455
            ....|........:||::|.|.| |.:|   :.|.|:..|.||:.||:||.||.|||:.|:||.|
  Fly   472 NAQPLFVDTTNSSIEFRNVSFEYEPGKP---IFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLFR 533

  Fly   456 FYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQA 520
            |::|..|.||:...||...:::.||..||||.|:.|||..||..||.||....:..|::.||..|
  Fly   534 FFEPNSGKVLIGGQDISAVDLESLRKVIAVVPQDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMA 598

  Fly   521 GAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQA 585
            ..|:.|.:.|..|.:.:||||.:||||:|||:|||||:::|..||:.|||||:||..:|..:.||
  Fly   599 DLHDSIMSWPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQA 663

  Fly   586 LDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNM--VRAGDINMPD 648
            |..|:.|||:|.::||||.::.||:|:.:.:|:|.|.|:|.:|:...|.|..:  .:....:...
  Fly   664 LTRATSGRTSICIAHRLSTVKDADEILVLENGRVGERGTHSELLRQNGLYARLWETQTQQFDPSR 728

  Fly   649 EVEKEDSIEDTK 660
            |:.:|.:.:.|:
  Fly   729 EINEEVAAKKTR 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 181/597 (30%)
ABC_membrane 108..354 CDD:279056 59/271 (22%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 106/239 (44%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
ABCB7NP_728642.2 ABC_membrane 164..437 CDD:294371 62/277 (22%)
ATM1 222..717 CDD:227590 167/518 (32%)
P-loop_NTPase 485..720 CDD:304359 106/237 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I2340
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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