DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and Abcc10

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001334325.1 Gene:Abcc10 / 224814 MGIID:2386976 Length:1526 Species:Mus musculus


Alignment Length:1408 Identity:310/1408 - (22%)
Similarity:546/1408 - (38%) Gaps:355/1408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 FGFIMCCIKALTLPAVVIIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALY 114
            ||   ||..||.|..:|.....|:..|:              |.|..|       ..||..|.| 
Mouse   282 FG---CCYLALGLLKMVGTMLGFSGPLL--------------LSLLVG-------FLEEGQEPL- 321

  Fly   115 DDSISYGILLTIASVVMFISGIFSVDVFNMV-------ALRQVT-RMRIKLFSSVIRQDIGWHDL 171
                |:|:|        ::.|:....|.:.|       .:|:|| :.|:.:.|::.|:       
Mouse   322 ----SHGLL--------YVLGLAGGTVISAVLQNQYGYEVRKVTLQARVAVLSTLYRK------- 367

  Fly   172 ASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSYGW--KLTLAVSSYI------ 228
            |.|...::....:|..:....||::.:|           |.||...|  .|.||::.|:      
Mouse   368 ALKLGPSRPPTGEVLNLLGTDSERLLNF-----------AGSFHEAWGLPLQLAITLYLLYQQVG 421

  Fly   229 ----------PLVILLNYYVAKFQGKLTAREQESYA---GAGNLAEEILSSIRTVVSFGGEKSEV 280
                      .|::.:|..:|.   ::.|..||...   ....|..|:||.||.:..|       
Mouse   422 MAFLAGLVLALLLVPVNKVIAT---RIMASNQEMLRHKDARVKLMTELLSGIRVIKFF------- 476

  Fly   281 QRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAF-WYGVNLIIDDRNVENKEYTPAILM 344
             |:|..|....||.:.|..      ..|:.:.||..|..: |..:               |.::.
Mouse   477 -RWEQALGDRVKACRTKEL------GRLRVIKYLDAACVYLWAAL---------------PVVIC 519

  Fly   345 IAFF--GIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSK-IDPLSTDGKLLNYGLRGDVE 406
            |..|  .:::|                .:..||.:|..:.|... |.||:....::|..|...|.
Mouse   520 ITIFITYVLMG----------------HQLTATKVFTALALVRMLILPLNNFPWVINGLLESKVS 568

  Fly   407 FQDV--FFRYPS-RPEVI--------------VHRGL---------------NIRIRAGQTVALV 439
            ...:  |...|| .||..              :|..|               :::::.|..|.:|
Mouse   569 LDRIQRFLDLPSYSPEAYYSPDPPAEPSTALELHEALFSWDPIGASQKTFISHLQVKKGMLVGIV 633

  Fly   440 GSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYG 504
            |..|||||:.:..:......:.|.|.:.:|.          ....:..|||.:...||..||.:|
Mouse   634 GKVGCGKSSLLAAITGELHRLCGWVAVSELS----------KGFGLATQEPWIQCATIRDNILFG 688

  Fly   505 KPGATQ---KEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILL 566
            |....|   :.:||.|    .::.::.||...::.:||:|..|||||:.|||:|||:.|...:.|
Mouse   689 KTFDAQLYREVLEACA----LNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYL 749

  Fly   567 LDEATSALDYQSEKQVQQALDLASKGRTT-IVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMA 630
            ||:..:|:|......:.....|.....|| ::.:||...:..||.::.:..|:::..|...:::.
Mouse   750 LDDPLAAVDADVANHLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEILP 814

  Fly   631 LEGAYYNMVRAGDINMPDEVEKEDSIEDTKQKSLALFEKSFETSPLNFEKGQKNSVQFEEPIIKA 695
            |..|           :|....:::.:..:.|          ..|..:.|:..:..::.|:.....
Mouse   815 LVQA-----------VPTAWAEKEQVATSGQ----------SPSVCDLERTTEEELEVEQSTCGC 858

  Fly   696 LI-KDTNAQSAEAPPEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLY------------- 746
            |: :::.::.|.|              |.:.:..|..:..|..:|:.|..|.             
Mouse   859 LVQEESKSEGAVA--------------LHVYRAYWRAMGSGLAAAILVSLLLMQATRNGADWWLA 909

  Fly   747 ---------------------PAFAVIF---------GEFYAALAEKDPEDALRR-TAVLSWACL 780
                                 |....:|         |..|..|.......|... ||.:.:..:
Mouse   910 HWLSQLKAGRNGSREDPASCSPGSTALFSPRLLLFSPGNLYTPLLSTPLHKAASNGTADVHFYLI 974

  Fly   781 GLAFLTG---LVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEA 842
            ..|.:.|   |...|:..||....:.....:.....:.::...|.::|  :...|.:..|.|.:.
Mouse   975 VYATIAGVNSLCTLLRAVLFAAGALQAAASLHHRLLHRLLMAPVTFYD--STPSGRVLNRFSSDV 1037

  Fly   843 VDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVREK 907
            ..:..::.:.|:.:   |:|.:..:.:.......|..|.|...|:  ..|....:....|..||.
Mouse  1038 ACVDDSLPFLLNIL---LANSVGLLGLLAVLGSGLPWLLLLLPPL--SFVYYSVQGYYRASFREL 1097

  Fly   908 QVIEEACRIATESITNI-----RTVAGL--RREADVIREYTEEIQRVEVLIRQ-------KLRWR 958
            :      |:.:.:.:.:     .|:|||  .|.|.....:.||.||:..|.::       .::|.
Mouse  1098 R------RLGSLTWSPLYSHLADTLAGLPVLRAAGATYRFEEENQRLLELNQRCQFASYATMQWL 1156

  Fly   959 GVLNSTMQASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFS---- 1019
            .:....|.|:...|.|     |..||...|       .::...|.| ::|:.:|:.|...|    
Mouse  1157 DIRLQLMGAAVVSAIA-----GIALVQHQQ-------GLANPGLVG-LVLSYALSLTGLLSGLVS 1208

  Fly  1020 ------AALIAGHRLFQILDRKPK------IQSPMGTIKNTLAKQLNLFEGVRYRGIQFRY-PTR 1071
                  |.:::..||.:.....|:      :|||.....:.|.:     ..|.::.:...| |..
Mouse  1209 SFTQTEAMMVSVERLEEYSCDVPQEPHSQPLQSPHQQRISWLTQ-----GSVEFQDVVLVYRPGL 1268

  Fly  1072 PDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRT 1136
            |:|  |:|:...|..|:.:.:||.:|.|||:...:|.|..:|:.|.:.:|:.|.. .|.|..:|:
Mouse  1269 PNA--LDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTS-QLELAELRS 1330

  Fly  1137 KLGIVSQEPTLFERSIAENI---AYGDNRR-------------SVSMVEIIAAAKS----ANAH- 1180
            :|.::.|||.||..:|.||:   ...::|.             :|:|.|..|..:|    .|.| 
Mouse  1331 QLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAMGESQACQRSQREAKNGHW 1395

  Fly  1181 SFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDT 1245
            .....|..|.|..:|.||..||.||:|.:.:||||:.:.|||.:||||:::|.:::||:||.:..
Mouse  1396 QCSALLTGGLDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICK 1460

  Fly  1246 ACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQ 1288
            ..:.:|.:.|||||:|:.|:|.:.|:|.|:|||..:...|.:|
Mouse  1461 RFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSALRNQ 1503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 300/1367 (22%)
ABC_membrane 108..354 CDD:279056 56/277 (20%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 66/272 (24%)
ABC_membrane 736..1006 CDD:279056 56/330 (17%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 85/252 (34%)
Abcc10NP_001334325.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.