DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and Abcb4

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_032856.2 Gene:Abcb4 / 18670 MGIID:97569 Length:1276 Species:Mus musculus


Alignment Length:1307 Identity:558/1307 - (42%)
Similarity:786/1307 - (60%) Gaps:67/1307 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVSTSSSEGKSQEEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIY 69
            |:.:.|::|:.:::.....||        |.|||:|.:.:..::|.|.:|.......||.::|::
Mouse    19 ELGSISNQGREKKKKVNLIGL--------LTLFRYSDWQDKLFMFLGTLMAIAHGSGLPLMMIVF 75

  Fly    70 SEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMFIS 134
            .|.|...||....|....| .:|.:...|:.|   ..|....|.|...:..|:|         ::
Mouse    76 GEMTDKFVDNTGNFSLPVN-FSLSMLNPGRIL---EEEMTRYAYYYSGLGGGVL---------VA 127

  Fly   135 GIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGHF 199
            ....|..:.:.|.||:.::|.|.|.:::||::||.|:.........:.|||.||.:||.:|||.|
Mouse   128 AYIQVSFWTLAAGRQIKKIRQKFFHAILRQEMGWFDIKGTTELNTRLTDDVSKISEGIGDKVGMF 192

  Fly   200 VYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEIL 264
            ...:..|.....:.|..||||||.:.:..|::.|.....||.....:.:|..:||.||.:|||.|
Mouse   193 FQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLSTAVWAKILSTFSDKELAAYAKAGAVAEEAL 257

  Fly   265 SSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIID 329
            .:||||::|||:..|::||:..|..|:|....|...:.:|..:...::|.|.|.|||||..|:| 
Mouse   258 GAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANISMGIAFLLIYASYALAFWYGSTLVI- 321

  Fly   330 DRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDG 394
                 :||||....|..||.|::||.::.:.||.:::||.|||.|..:|.:||...|||..|..|
Mouse   322 -----SKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGAAYVIFDIIDNNPKIDSFSERG 381

  Fly   395 KLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDP 459
            ...: .::|::||.||.|.||||..:.:.:|||:::::||||||||:|||||||.||||||.|||
Mouse   382 HKPD-NIKGNLEFSDVHFSYPSRANIKILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDP 445

  Fly   460 VFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHE 524
            ..|.:.:|..|||.:|::.||..|.||.||||||..|||:||.||:...|..|||.|..:|.|::
Mouse   446 TEGKISIDGQDIRNFNVRCLREIIGVVSQEPVLFSTTIAENIRYGRGNVTMDEIEKAVKEANAYD 510

  Fly   525 FITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLA 589
            ||..||:.:.:::|:||:||||||||||||||||::|||||||||||||||.:||.:||.|||.|
Mouse   511 FIMKLPQKFDTLVGDRGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKA 575

  Fly   590 SKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYY---NMVRAGDINMPDEVE 651
            .:||||||::||||.||.||.|....||.::|:|||.:||..||.|:   ||..||...:.:|.|
Mouse   576 REGRTTIVIAHRLSTIRNADVIAGFEDGVIVEQGSHSELMKKEGIYFRLVNMQTAGSQILSEEFE 640

  Fly   652 KEDSIEDTKQKSLALFEKSFETSPLN-----FEKGQKNSVQFEEPIIKALIKDTNAQSAEAPPEK 711
            .|  :.|.|...        :.:|..     |....|.|:  :.|....|.::||...|..||. 
Mouse   641 VE--LSDEKAAG--------DVAPNGWKARIFRNSTKKSL--KSPHQNRLDEETNELDANVPPV- 692

  Fly   712 PNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALAEKDPEDALRRTAVLS 776
                 :|.::|:|.|.||.|.::||:.|:|.|.|.|||::|..|..|.....|.....::..:.|
Mouse   693 -----SFLKVLKLNKTEWPYFVVGTVCAIANGALQPAFSIILSEMIAIFGPGDDAVKQQKCNMFS 752

  Fly   777 WACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGE 841
            ...|||..|:....|||.:.|..||..||||:|:|.|.||:.|::.||||..||.||||.||:.:
Mouse   753 LVFLGLGVLSFFTFFLQGFTFGKAGEILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATD 817

  Fly   842 AVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVRE 906
            |..:|||.|..|:.:.|..:|..:.:.::..|.|:|.||.|:..|.|..:.|:|.||::....|:
Mouse   818 AAQVQGATGTRLALIAQNTANLGTGIIISFIYGWQLTLLLLSVVPFIAVAGIVEMKMLAGNAKRD 882

  Fly   907 KQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQ---RVEVLIRQKLRWRGVLNSTMQAS 968
            |:.:|.|.:||||:|.|||||..|.:|......|.|::.   |..|   :|....|:..|..||.
Mouse   883 KKEMEAAGKIATEAIENIRTVVSLTQERKFESMYVEKLHGPYRNSV---RKAHIYGITFSISQAF 944

  Fly   969 AFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALIAGHRLFQILD 1033
            .:|:||....:|..|:..|.:.|:|:|.|...::.|::.|..:.:|.|.::.|.::...||.:.:
Mouse   945 MYFSYAGCFRFGSYLIVNGHMRFKDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAYLFSLFE 1009

  Fly  1034 RKPKIQSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSG 1097
            |:|.|.|..|.     ....:.||| |.:..:.|.||||.:..:|.||.|||.||||:||||.||
Mouse  1010 RQPLIDSYSGE-----GLWPDKFEGSVTFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVGSSG 1069

  Fly  1098 CGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNR 1162
            |||||.||||:|:|||..|::.:|..:.: .|.:..:|.:||||||||.||:.|||||||||||.
Mouse  1070 CGKSTVVQLLERFYDPMAGSVLLDGQEAK-KLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNS 1133

  Fly  1163 RSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEA 1227
            |.|...||:.|||.||.|.||.:||..|:||:|.:||||||||||||||||||:|.|::||||||
Mouse  1134 RVVPHDEIVRAAKEANIHPFIETLPQKYNTRVGDKGTQLSGGQKQRIAIARALIRQPRVLLLDEA 1198

  Fly  1228 TSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQGGIY 1292
            |||||.:||::||:|||.|..|||||||||||||:||||:|.||:||:|.|.|.|.||::|.|||
Mouse  1199 TSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQKGIY 1263

  Fly  1293 AKLHKTQ 1299
            ..:...|
Mouse  1264 FSMVNIQ 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 536/1221 (44%)
ABC_membrane 108..354 CDD:279056 81/245 (33%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 141/239 (59%)
ABC_membrane 736..1006 CDD:279056 101/272 (37%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 149/239 (62%)
Abcb4NP_032856.2 PTZ00265 30..1269 CDD:240339 554/1293 (43%)
ABC_membrane 58..342 CDD:279056 96/302 (32%)
ABC_MTABC3_MDL1_MDL2 392..628 CDD:213216 140/235 (60%)
Interaction with HAX1. /evidence=ECO:0000250 622..646 7/25 (28%)
ABC_membrane 712..982 CDD:279056 101/272 (37%)
ABC_MTABC3_MDL1_MDL2 1031..1270 CDD:213216 149/239 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I3072
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H136368
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1700
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R932
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.710

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