DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and pgp-9

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_507487.1 Gene:pgp-9 / 180165 WormBaseID:WBGene00004003 Length:1294 Species:Caenorhabditis elegans


Alignment Length:68 Identity:19/68 - (27%)
Similarity:27/68 - (39%) Gaps:23/68 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 VGRVETGMIKPGMVVTF--APTGLTTE-----------VKSVEMHHESLLEALPGDNVGFNVKNV 303
            :|.|:...||||..|.:  |.:|.|..           |.:||..|.|          |.::.|:
 Worm   144 LGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRS----------GRDLVNM 198

  Fly   304 AVK 306
            |.|
 Worm   199 AKK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 19/68 (28%)
MdlB 711..1299 CDD:440747
pgp-9NP_507487.1 MdlB 30..620 CDD:440747 19/68 (28%)
MdlB 689..1273 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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