DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr65 and pgp-1

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_502413.1 Gene:pgp-1 / 178215 WormBaseID:WBGene00003995 Length:1321 Species:Caenorhabditis elegans


Alignment Length:1332 Identity:501/1332 - (37%)
Similarity:753/1332 - (56%) Gaps:85/1332 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERDEVSTSSSEGKSQEEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVV 66
            |.|.:. |:.|.|...:|..    |....::..:|:|::|..|...||.|.::..|....||.:.
 Worm    36 EGDNID-SNGEIKITRDAKE----EVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMS 95

  Fly    67 IIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVM 131
            |:..:.:...::..:....:.:.. ||. |...|.|:...:..|...     ||..:    :|.|
 Worm    96 ILQGKVSQAFINEQIVINNNGSTF-LPT-GQNYTKTDFEHDVMNVVW-----SYAAM----TVGM 149

  Fly   132 FISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKV 196
            :.:|..:|..:..||.:...|:|.:...|::||:|.|.|..........:.|::|::::|..:|:
 Worm   150 WAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKI 214

  Fly   197 G-HFVYL---VVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAG 257
            | .|.||   :.|||    ::|::.|:|||.:.:..|:..|..:.:||.......||...||.||
 Worm   215 GMAFQYLSQFITGFI----VAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAG 275

  Fly   258 NLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWY 322
            .:.||.:||||||||..|.:.|::||...:..|:||...||.|.|:|...:::..::|.|.||:.
 Worm   276 KVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYI 340

  Fly   323 GVNLIID-DRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSK 386
            ||..:.| ..|..:       ::..|..:::|:..:....|.|....||:|.|:.:::|:|....
 Worm   341 GVGWVHDGSLNFGD-------MLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPV 398

  Fly   387 IDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQ 451
            ||..|..|: .:..::||:..::|.|.|||||:|.:.||:|:|:.|||||||||||||||||.:.
 Worm   399 IDSSSKAGR-KDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIIS 462

  Fly   452 LLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAA 516
            ||.|:||.:.|.:.:|.:|:|..|:::||.|:|||.|||.||..||.:|||.||.|.|::|:.||
 Worm   463 LLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAA 527

  Fly   517 ATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQ 581
            ...|.|.:||..||..|.:::|:||:||||||||||||||||::|||||||||||||||.:||..
 Worm   528 CKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGI 592

  Fly   582 VQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVRA----- 641
            ||||||.|:||||||:::||||.||.||.|:...:|:|:|.|.|..|||.:|.||::|.|     
 Worm   593 VQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTD 657

  Fly   642 -------GDINMPDEVEKEDS-----------IEDTKQKSLALFEKSFETSPLNFEKGQKNSVQF 688
                   |..:..:.|.::.|           ::|...:..:....|....|:..||        
 Worm   658 AVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEK-------- 714

  Fly   689 EEPIIKALIKDTNAQSAEAPPEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIF 753
            ||.|.|..:.....:..|...:|.|.|    .||..|:.....|.:|..:|...||:||.::|.|
 Worm   715 EERIGKDALSRLKQELEENNAQKTNLF----EILYHARPHALSLFIGMSTATIGGFIYPTYSVFF 775

  Fly   754 GEFYAALAEKDPEDALRRTAVLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVN 818
            ..|....| .:|.|.|.:....:...|.||...|:..||.|:....|...||..:|...|..:::
 Worm   776 TSFMNVFA-GNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLS 839

  Fly   819 QEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLA 883
            |.:|:||...|:.|.:|.||:.:..:::.||.:..|.:|..|.:.::.:.:|.:|.|::|||.:|
 Worm   840 QHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIA 904

  Fly   884 NCPIIVGSVILEAKMMSNAVVREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEI---- 944
            ..||:.....|..:..:...|:......::.:||.|:|.|:|||..|.||......:.|::    
 Worm   905 ILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPH 969

  Fly   945 -QRVEVLIRQKLRWRGVLNSTMQASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMML 1008
             :.::....|.|.: |..:|.:......||.:.|..  ::.....:....:::|...:...:..|
 Worm   970 KEAIKEAFIQGLSY-GCASSVLYLLNTCAYRMGLAL--IITDPPTMQPMRVLRVMYAITISTSTL 1031

  Fly  1009 AQSLAFTPAFSAALIAGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEGVRYRGIQFRYPTRPD 1073
            ..:.::.|.::.|..||..:|.:|.:..||.|     .:...::..|:..|.::.::|.||.||:
 Worm  1032 GFATSYFPEYAKATFAGGIIFGMLRKISKIDS-----LSLAGEKKKLYGKVIFKNVRFAYPERPE 1091

  Fly  1074 AKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKL 1138
            .:||.||...|..|||:||||.|||||||.|.||:|:||...|.|.||..:|: .|..:..|:::
 Worm  1092 IEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIK-TLNPEHTRSQI 1155

  Fly  1139 GIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSG 1203
            .|||||||||:.||||||.||.:..||:|.::..||:.||.|:||..||.|::||:|.|||||||
 Worm  1156 AIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSG 1220

  Fly  1204 GQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVI 1268
            |||||||||||||||||||||||||||||.:||::||:|||.|..|||||||||||:||.|||.|
 Worm  1221 GQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCI 1285

  Fly  1269 CVIQNGQVVEQGNHMQLISQGGIYAKLHKTQK 1300
            .|:.||.::|:|.|.||:|:.|.|.||  |||
 Worm  1286 AVVSNGTIIEKGTHTQLMSEKGAYYKL--TQK 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 481/1241 (39%)
ABC_membrane 108..354 CDD:279056 74/250 (30%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 140/248 (56%)
ABC_membrane 736..1006 CDD:279056 69/274 (25%)
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216 145/239 (61%)
pgp-1NP_502413.1 PTZ00265 38..1311 CDD:240339 495/1322 (37%)
ABC_membrane 81..367 CDD:279056 84/307 (27%)
ABC_MTABC3_MDL1_MDL2 416..653 CDD:213216 139/236 (59%)
ABC_membrane 760..1028 CDD:279056 69/271 (25%)
ABC_MTABC3_MDL1_MDL2 1077..1316 CDD:213216 148/242 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I1904
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm4744
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.790

Return to query results.
Submit another query.