DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and haf-4

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001021666.1 Gene:haf-4 / 171639 WormBaseID:WBGene00001814 Length:787 Species:Caenorhabditis elegans


Alignment Length:662 Identity:198/662 - (29%)
Similarity:332/662 - (50%) Gaps:76/662 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIK--------ALTLPAVVIIYSE------ 71
            :.|.|:|.|         |.|:|:..:|.:.||...|.        :.|..:.:|:..|      
 Worm   106 LTEKLKPDE---------FLTFGDTAFLVWNFISAIILNSSWTRYFSRTPSSYIILEDEDLEVAP 161

  Fly    72 -FTSMLVDRAMQ----------------FGTSSNVHALPLFGG---GKTLTNASREENNEALYDD 116
             .|..|:.|.:|                |..|.....:|.:.|   ...:...|....:.|:|  
 Worm   162 KQTFELIFRLLQYCKREWLWHISGFSWLFIYSITRIFVPYYTGQVIATVVATKSYPALSNAVY-- 224

  Fly   117 SISYGILLTIASVVMFISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSM 181
                  ::||.|:|..::..|....|.....|....:|..||..:::||:.::|.......|..:
 Worm   225 ------IMTIISLVSAVAAGFRGGSFEYAYARIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTSRL 283

  Fly   182 VDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLT 246
            ..|.:.:.|.::..|..|:...|..:.::.......|:|:|.....:|::.:.:.....:...|:
 Worm   284 AADCQTMSDTVALNVNVFLRNCVMLLGSMIFMMKLSWRLSLVTFILVPIIFVASKIFGTYYDLLS 348

  Fly   247 AREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFL-----VPARKASQWKGAFSGLSDA 306
            .|.|::.|.:.::|||:||::|||.||..|..|..|:...|     |...||..:.| |..:|: 
 Worm   349 ERTQDTIAESNDVAEEVLSTMRTVRSFSCENVEADRFYGKLTHTLDVTRTKAIAYIG-FLWVSE- 411

  Fly   307 VLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAF--FGIIVGADNIARTAPFLESFAT 369
            :.:|.:.:|   ..|||.:|::..:       ....|:::|  :.:.:| ||:.:..........
 Worm   412 LFQSFIIVS---VLWYGGHLVLTQK-------MKGDLLVSFLLYQMQLG-DNLRQMGEVWTGLMQ 465

  Fly   370 ARGCATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQ 434
            :.|.:..:|:.||...:|   ..:|:.:...:.|.:||::|.|.||:|.:..:.:.|:..:..|:
 Worm   466 SVGASRKVFEYIDREPQI---QHNGEYMPENVVGKIEFRNVHFSYPTRSDQPILKDLSFTVEPGE 527

  Fly   435 TVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQ 499
            ||||||.||.|||:|:.||:.||.|..|.||:|.:.:.::...::...||:||||||||..::.:
 Worm   528 TVALVGPSGSGKSSCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKIALVGQEPVLFARSVME 592

  Fly   500 NISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKI 564
            |:.||...| ..||..:...|.||.||......|.:.:||:|:|:||||||||||||||::.|.|
 Worm   593 NVRYGVEVA-DTEIIRSCEMANAHGFIMQTTLKYETNVGEKGTQMSGGQKQRIAIARALVREPAI 656

  Fly   565 LLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLM 629
            |||||||||||.:||..||:|:.....|::.|:::||||.:..|||||.|:.|:|.:.|:|:.|:
 Worm   657 LLLDEATSALDTESEHLVQEAIYKNLDGKSVILIAHRLSTVEKADKIVVINKGRVEQIGNHETLL 721

  Fly   630 A-LEGAYYNMVR 640
            . ..|.|..:|:
 Worm   722 KDTNGTYAKLVQ 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 178/561 (32%)
ABC_membrane 108..354 CDD:279056 57/252 (23%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 108/237 (46%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
haf-4NP_001021666.1 3a01208 16..732 CDD:273363 197/659 (30%)
ABC_membrane 189..449 CDD:279056 62/279 (22%)
ABC_MTABC3_MDL1_MDL2 498..735 CDD:213216 108/237 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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