DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and LOC1276927

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_316337.5 Gene:LOC1276927 / 1276927 VectorBaseID:AGAMI1_007925 Length:718 Species:Anopheles gambiae


Alignment Length:610 Identity:211/610 - (34%)
Similarity:315/610 - (51%) Gaps:69/610 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   729 WCYL------ILGTI-SAVAVGFLYPAFAVIFGEF------YAALAEKDPEDA-----LRRTAVL 775
            |.||      ::|.: :|:||.:.......:.|..      ||..:.||...|     :|..|: 
Mosquito   127 WHYLRRHLGKLIGAVMAALAVAYFNIQIPNLLGVIVNKLARYAGSSLKDINTASFFRDMRGPAL- 190

  Fly   776 SWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSG 840
              ...|:........||...|.:..|..:...:|...|..::.|::.:||  :|..|.|..||:.
Mosquito   191 --QLFGMYLAQSGFTFLYILLLSQIGEQMAASIRQDLFKQIIIQDLEFFD--HNRTGELVNRLTA 251

  Fly   841 EAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNW---KLALLCLANCPIIVGSVILEAKMMSNA 902
            :..|.:.:....:|   |.|.:|...|...:...|   :||.:.|.:.|:.|....|..:.:.:.
Mosquito   252 DVQDFKSSFKQCIS---QGLRSFAQLVGGGISLFWISPQLASIALVSVPVAVAMFSLLGRSLRHL 313

  Fly   903 VVREKQVIEEACRIATESITNIRTVAGLRREADVIREYTE-EIQRVE----VLIRQKLRWRGVLN 962
            ..:.:...|.|..::.|:::|||||   |..|.   ||:| |:.|||    .::.|:|   |...
Mosquito   314 SKKAQAQSERATSVSEEALSNIRTV---RASAS---EYSEIELFRVETDKSAVLSQQL---GAGI 369

  Fly   963 STMQASAFFA----YAVALCYGGVLVSEGQLPFQDIIK-------VSETLLYGSMMLAQSLAFTP 1016
            :..||.:...    ....|..||..:|...:...|::.       |..:|..||::|...:    
Mosquito   370 AVFQALSNLCLNGMVLTTLLLGGHFMSANSISAGDLMAFLVAAQGVQRSLAQGSILLGSVI---- 430

  Fly  1017 AFSAALIAGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEGVRYRGIQFRYPTRPDAKILNGLD 1081
               ..:.||.|:|:.|..:|::....|.|    ....||...:|:..:||.|||||:.::|...:
Mosquito   431 ---RGMTAGARVFEFLSLEPRVDLKHGLI----IPDSNLRGEIRFEEVQFIYPTRPNQRVLKDFN 488

  Fly  1082 LEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKL-GIVSQEP 1145
            |.:..||||||||.||.||||...||:|:|:|..|.|.||..::.| |....:|.:| |.:.|:|
Mosquito   489 LVLRPGQTVALVGASGSGKSTVAALLERFYEPTAGRITIDGYELGH-LAPSWLRGELIGFIEQQP 552

  Fly  1146 TLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIA 1210
            .||..:|.|||.||  |.:.:..|::.|||.:.:|.|:..||:||:|.:|.||.||||||:||||
Mosquito   553 VLFGTTIYENIRYG--RPNATREEVMEAAKMSQSHEFVSRLPDGYETMVGERGIQLSGGQRQRIA 615

  Fly  1211 IARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQ 1275
            |||||::.|.||:|||||||||..||.:||:|||.|...||.:||||||||::|||||.|:..||
Mosquito   616 IARALLKQPTILILDEATSALDAASEAVVQRALDAAVLDRTTLVIAHRLSTIRNADVIVVLDQGQ 680

  Fly  1276 VVEQGNHMQLISQGGIYAKLHKTQK 1300
            :||.|.|..|:...|.|.:|.|.|:
Mosquito   681 IVEVGTHDSLLKAQGYYYELVKQQE 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 210/607 (35%)
LOC1276927XP_316337.5 None
Blue background indicates that the domain is not in the aligned region.

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