DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and LOC1273250

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_312209.4 Gene:LOC1273250 / 1273250 VectorBaseID:AGAMI1_007085 Length:706 Species:Anopheles gambiae


Alignment Length:639 Identity:214/639 - (33%)
Similarity:326/639 - (51%) Gaps:49/639 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 NSVQFEEPIIKALIKDTNAQSAEAPPEKPNFFRT-FSRILQLAKQE-W-------CYLILGTISA 739
            |..:.||......|......|....|.|.....: ..|:|..||.| |       | ||:.:...
Mosquito    86 NGGKVEESAKNGAIAGKEPDSIAKQPAKLQLRSSDVKRLLGFAKSEQWNITGGIGC-LIISSAIT 149

  Fly   740 VAVGFLYPAFAVIFGEFYAALAE----KDPEDALRRTAVLSWACL---GLAFLTGLVCFLQTYLF 797
            ::|.|   ....|....||:.||    |:..|..         ||   |:..|.||..|.:.|||
Mosquito   150 MSVPF---GLGKILDIIYASSAETGMAKEKLDQF---------CLLLGGIFLLGGLANFGRVYLF 202

  Fly   798 NYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPLSGMIQALSN 862
            :.|.:.:|..:||..:::|:|||.||||  ....|.|..|||.:...:..::...||..:::.:.
Mosquito   203 SNASLRITKNIRAKVYSSMLNQEAGWFD--RKGTGELVNRLSSDTYLVGNSLSMNLSDGLRSTAM 265

  Fly   863 FISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVREKQVIEEACRIATESITNIRTV 927
            .::...:.:|.:..|||:.:...|.:.|..::..:.:.|..........|..:|..|.:.|::||
Mosquito   266 ILAGTGMMIYTSPHLALVGMCIVPCVAGGAVVYGRYVRNITRELMDKYAEIMKIGEERLGNVKTV 330

  Fly   928 AGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNSTMQASAFFAYAVALCYGGVLVSEGQLPFQ 992
            ....:|....:.::|::.....:..::.:.|.........|........|.|||.:|:..::   
Mosquito   331 KVFCKERFEKQLFSEQLLDALNIGYRETKARATFYGMTGLSGNIIILSVLYYGGTMVNNAEM--- 392

  Fly   993 DIIKVSETLLYGSMMLAQSLAFTPAFSAALIAG----HRLFQILDRKPKIQSPMG-TIKNTLAKQ 1052
            .|..::..:||.. ..|.|:.....|...|..|    .||::|:|||..|....| .:.|..|.|
Mosquito   393 TIGALTSFILYAG-YTAISIGGLSNFYTELNKGVGSASRLWEIIDRKYAIPIDGGIEVSNPPAGQ 456

  Fly  1053 LNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGT 1117
                  :::|.:.|.||:||||.||||::|.:..|.:.|:||.||.||||...|:.|.|||.:|:
Mosquito   457 ------IQFRDVIFHYPSRPDAPILNGVNLTIEPGTSTAVVGRSGSGKSTIASLMLRLYDPAQGS 515

  Fly  1118 IHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNR-RSVSMVEIIAAAKSANAHS 1181
            :.:|..|:: ||....:|..:|.|:|||.||..||.|||.||.|. ..:|........:.|:...
Mosquito   516 VRLDGTDLR-DLNPSSLRRHIGAVNQEPVLFSGSIRENILYGLNMGEKISESAFQRVVREAHVDE 579

  Fly  1182 FIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTA 1246
            |:...|:|.||.:|.||..||||||||:|||||::||||||:|||||||||..||:|:|.||:..
Mosquito   580 FVRHFPDGLDTLVGQRGVMLSGGQKQRVAIARAIIRNPKILILDEATSALDAVSEELIQNALERL 644

  Fly  1247 CSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLI-SQGGIYAKLHKTQ 1299
            ...||.:.|||||||::||..|.|:::||:||.||:.||| ::||::.:|.:.|
Mosquito   645 TKNRTVLTIAHRLSTIRNATNIAVLRDGQIVEHGNYAQLIATEGGVFRELVQRQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 207/610 (34%)
LOC1273250XP_312209.4 MdlB 122..698 CDD:440747 206/601 (34%)
Blue background indicates that the domain is not in the aligned region.

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