DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ABCB8

DIOPT Version :9

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001269220.1 Gene:ABCB8 / 11194 HGNCID:49 Length:735 Species:Homo sapiens


Alignment Length:601 Identity:209/601 - (34%)
Similarity:311/601 - (51%) Gaps:65/601 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LTLPAVVIIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILL 124
            |.|..:|.:.:::|...|...|....:.:.|.|.|:|....||                 :|.|:
Human   167 LLLGQLVEVVAKYTRDHVGSFMTESQNLSTHLLILYGVQGLLT-----------------FGYLV 214

  Fly   125 TIASVVMFISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIR 189
            .::.                |..|....||..||||::||||.:.|..........:..||::.:
Human   215 LLSH----------------VGERMAVDMRRALFSSLLRQDITFFDANKTGQLVSRLTTDVQEFK 263

  Fly   190 DG----ISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQ 250
            ..    ||:.:..... |.|.::::::   ...:|||.:....|.::.:...:.....||:.:.|
Human   264 SSFKLVISQGLRSCTQ-VAGCLVSLSM---LSTRLTLLLMVATPALMGVGTLMGSGLRKLSRQCQ 324

  Fly   251 ESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKASQWKG----AFSGLSDAVLKSM 311
            |..|.|..:|:|.|.::|||.:|..|:.|.:||...|...|..::..|    .|.|||:.....|
Human   325 EQIARAMGVADEALGNVRTVRAFAMEQREEERYGAELEACRCRAEELGRGIALFQGLSNIAFNCM 389

  Fly   312 LYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESF--ATARG-- 372
            :    .|..:.|.:|      |..::.|...||    ..:|.:..:.|:...|...  ...||  
Human   390 V----LGTLFIGGSL------VAGQQLTGGDLM----SFLVASQTVQRSMANLSVLFGQVVRGLS 440

  Fly   373 CATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVA 437
            ....:|:.:.|...| |||....:....|||.|.||:|.|.||.||...|.:...:.:..|:.||
Human   441 AGARVFEYMALNPCI-PLSGGCCVPKEQLRGSVTFQNVCFSYPCRPGFEVLKDFTLTLPPGKIVA 504

  Fly   438 LVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN-IAVVGQEPVLFLGTIAQNI 501
            |||.||.||:|...||:|||||..|.|:||..|:|..:..|||.. :..:.||||||..||.:||
Human   505 LVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENI 569

  Fly   502 SYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILL 566
            .:||..|:.:|:..||.:|.||||||:.||.|.:::||||:.||||||||:|||||||:.|.:|:
Human   570 RFGKLEASDEEVYTAAREANAHEFITSFPEGYNTVVGERGTTLSGGQKQRLAIARALIKQPTVLI 634

  Fly   567 LDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMAL 631
            |||||||||.:||:.||:|||.||.|||.:|::||||.:|||..||.:.||:|.|.|:|::|:..
Human   635 LDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELLKK 699

  Fly   632 EGAYYNMVRAGDINMP 647
            .|.|..::|...::.|
Human   700 GGLYAELIRRQALDAP 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 PTZ00265 91..1300 CDD:240339 202/570 (35%)
ABC_membrane 108..354 CDD:279056 58/253 (23%)
ABC_MTABC3_MDL1_MDL2 405..642 CDD:213216 125/237 (53%)
ABC_membrane 736..1006 CDD:279056
ABC_MTABC3_MDL1_MDL2 1059..1299 CDD:213216
ABCB8NP_001269220.1 MdlB 165..713 CDD:224055 208/597 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 712..735 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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