DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and ABCB13

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_174115.1 Gene:ABCB13 / 839687 AraportID:AT1G27940 Length:1245 Species:Arabidopsis thaliana


Alignment Length:1319 Identity:440/1319 - (33%)
Similarity:694/1319 - (52%) Gaps:113/1319 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TPAAQKKKKTKEKAQPMVSYTELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIVVYSELVAMFIE 83
            |.|.::||..|:::   ||...||......||.::|.|.:.|.:.....|:..|.:         
plant    16 TEAKEEKKNIKKES---VSLMGLFSAADKLDYFLMLLGGLGACIHGATLPLFFVFF--------- 68

  Fly    84 RTLGQGTSSVTIGLSLFGGGKILTNASYEENMQELRKDSVSFGILMTLNTLLMLFSG-VYYVDAF 147
                               ||:|      :::..|..|..:....::.|.|.:::.| |.:|.|:
plant    69 -------------------GKML------DSLGNLSTDPKAISSRVSQNALYLVYLGLVNFVSAW 108

  Fly   148 NRLAL------KLTVRMRREFFKATLRQEIGWHDM-AKDQNFAVRITDNMEKIRSGIAENLGHYV 205
            ..::.      :.|.|:|..:.|:.|.::|.:.|. |:|.|....|:.:...::..|.:...|.:
plant   109 IGVSCWMQTGERQTARLRINYLKSILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTDHVL 173

  Fly   206 EIMCDVIISVVLSFIYGWKLALAIVFYIPLTLVVNSAVAHYQGKLTGQEQSSYVRASSVVEEVIG 270
            ..:...|...|:.|:..|:|.|..:..:||..:.....|.....::.:.:::|..|..|.|||:.
plant   174 RYLSQFIAGFVIGFLSVWQLTLLTLGVVPLIAIAGGGYAIVMSTISEKSETAYADAGKVAEEVMS 238

  Fly   271 AIRTVVAFGGERSESLRYDSLLKPALKAGKWKGAFSGLSDTVMKAMLFITGAGSFWYGANLILYY 335
            .:|||.||.||......|.:.||.|||.||..|...||...:..::||...|...||.:.|:.:.
plant   239 QVRTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRHG 303

  Fly   336 RDPSIPIDEREYTPAVVMIVISGIIVSANQISRTSPFLETFAMARGSASAILDVIDRTSLIDPLS 400
            :.          ..|.....|..:|.|...:.:.:|.|...|..|.:|:.|..:|...:     |
plant   304 KT----------NGAKAFTTILNVIFSGFALGQAAPSLSAIAKGRVAAANIFRMIGNNN-----S 353

  Fly   401 KAGKILNYG-----LKGAVEFRDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQ 460
            ::.:.|:.|     :.|.:||:.|.|.||:|.: :|...|:..:..|:|.|.|||||.||||.|.
plant   354 ESSQRLDEGTTLQNVAGRIEFQKVSFAYPSRPN-MVFENLSFTIRSGKTFAFVGPSGSGKSTIIS 417

  Fly   461 LLQRFYDPVFGQVLLDGEDVRKYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEVEDA 525
            ::||||:|..|::||||.|::...:||.|..:.:|.|||.||..:|..||..||..|...::.:|
plant   418 MVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTIASNILLGKENANMDQIIEA 482

  Fly   526 AKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHSEKL 590
            ||||||..||.:|..||:|.:.|.|.||||||:||||||||:::.||||||||||||||..|||:
plant   483 AKAANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKI 547

  Fly   591 VQAALDKACKGRTTLVVSHRLSAIRHAHRIVYIENGKAVEQGTHEELMKLEGFYHKMVTVHSYDD 655
            ||.|||...:.|||:||:||||.||:..:||.:.:|:..|.|:|.|||...|.|           
plant   548 VQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELMLRGGDY----------- 601

  Fly   656 SAEELLNELEEVAEIKERKMSYEVEPYQLGTRNS--IVSLEKNAEF---QMKNLNGLANITMNQE 715
              ..|:|..|...:...|.:..|....|.|:.:|  :.|..:.:.|   |.|..|          
plant   602 --ATLVNCQETEPQENSRSIMSETCKSQAGSSSSRRVSSSRRTSSFRVDQEKTKN---------- 654

  Fly   716 IDDPRVPSANFISTFFRILGWARPEWSFLIIGAICAGLYGVTMPVFSVVLAELYGSLAKPTDEEV 780
             ||.:...:: .|..:.::....|||.:.::|:|.|.|.|...|:||:.:|.:..:...|....:
plant   655 -DDSKKDFSS-SSMIWELIKLNSPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPFPNVI 717

  Fly   781 LEQSASMAIISLVIGIAAGVVCYIQTFFFNLAGVWLTTRMRSKTFRCIMNQEMGWFDRKENSIGA 845
            ......:|||....||....:..:|.:|:.|.|..||:|:|...|..|::.|:||||..||:.|:
plant   718 KRDVEKVAIIFAGAGIVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGS 782

  Fly   846 LSARLSGDAASVQGAIGFPLSNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIVFEARF 910
            |::.|:.||..|:.|:...||.|:|..:..:.::|:||.|||.:|.:..:..|.::|:.:.|..|
plant   783 LTSILAADATLVRSALADRLSTIVQNLSLTVTALALAFFYSWRVAAVVTACFPLLIAASLTEQLF 847

  Fly   911 GEKSALKEKEVLEETSRIATETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRLKWRGLVNS 975
            .:.............:.:|.|.|..|||||....|:::.:.:..|:.:.......|....|....
plant   848 LKGFGGDYTRAYSRATSVAREAIANIRTVAAYGAEKQISEQFTCELSKPTKNAFVRGHISGFGYG 912

  Fly   976 LGKSLMFFGYAVTLTYGGHMCADGKIKFETIMKISNTMLYGLFILAQSLAFTPAFNAALLSANRM 1040
            |.:.|.|..||:.|.|...:....:..|...:|....::...|.::::||.||.......:...:
plant   913 LSQFLAFCSYALGLWYVSVLINHKETNFGDSIKSFMVLIVTAFSVSETLALTPDIVKGTQALGSV 977

  Fly  1041 YEIIDRKPQI--QSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSYPSRPHIKVLQNFNLDINQ 1103
            :.::.|:.:|  ..|.|..:.|           |:..:.:|.::|.||:||.|.:.:|.||.::.
plant   978 FRVLHRETKISPDQPNSRMVSQ-----------VKGDIEFRNVSFVYPTRPEIDIFKNLNLRVSA 1031

  Fly  1104 GQTVALVGASGSGKSTCVQLLMRYYDPDEGKILIDQESIHHDMDLKTLRRRLGIVSQEPSLFEKS 1168
            |:::|:||.|||||||.:.|:||:|||..|.:.||.:.| ..::|::||::|.:|.|||:||..:
plant  1032 GKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDI-KTLNLRSLRKKLALVQQEPALFSTT 1095

  Fly  1169 IADNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQLSGGQKQRIAIARAMV 1233
            |.:||.||  :......:|:||||.|||||||:.:...|.|..|.||.|||||||||:|||||::
plant  1096 IYENIKYG--NENASEAEIMEAAKAANAHEFIIKMEEGYKTHAGDKGVQLSGGQKQRVAIARAVL 1158

  Fly  1234 RNPKILLLDEATSALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNANVICVIQAGKIVEQGS 1298
            ::|.:|||||||||||..||::||:|||....|||.:::|||||||:.|:.:.|:..|::||:||
plant  1159 KDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGS 1223

  Fly  1299 HSQLLA-KNGIYSKLYRCQ 1316
            |.:|:: .||.|.:|...|
plant  1224 HRELVSIPNGFYKQLTSLQ 1242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 422/1250 (34%)
ABC_membrane <147..333 CDD:279056 52/192 (27%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 121/234 (52%)
ABC_membrane 749..1019 CDD:279056 74/269 (28%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 119/240 (50%)
ABCB13NP_174115.1 PTZ00265 54..1241 CDD:240339 426/1275 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 180 1.000 Domainoid score I1042
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

Return to query results.
Submit another query.