DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and ABCB29

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_196011.1 Gene:ABCB29 / 830269 AraportID:AT5G03910 Length:634 Species:Arabidopsis thaliana


Alignment Length:664 Identity:189/664 - (28%)
Similarity:317/664 - (47%) Gaps:99/664 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 PYQLGTRNSIVSLEKNAEFQMKNLNGLANITMNQEIDDPRVPSANFISTFFRILGWARPEWSFLI 745
            |:|...|.  :|..|.:..:::     ||.|:|         |...:.|   |..:.:.|...::
plant    32 PFQPSPRP--LSFCKPSALRLR-----ANTTVN---------SLKALET---IKPYLQSESKTVL 77

  Fly   746 IGAICAGLYGVTMPVFSVV-LAELYGSLAKPTDEEVLEQSASMAIISLVIG---IAAGVVC---- 802
            :|.:|:        ..||| |:::...|...|.    ..:|:.|.::.:.|   :.||:|.    
plant    78 LGWLCS--------CVSVVSLSQIVPRLGSFTS----NLNANAASLTKLKGECLVLAGLVLAKVV 130

  Fly   803 --YIQTFFFNLAGVWLTTRMRSKTFRCIMNQEMGWFDRKEN-SIGALSARLSGDAASVQGAIGFP 864
              |:|..|...|.:....::|...:|.::.:|:.:|:.... |.|.::.|::.:|:.|...|...
plant   131 AYYLQQAFLWEAALNTVYKIRVFAYRRVLERELEFFEGGNGISSGDIAYRITAEASEVADTIYAL 195

  Fly   865 LSNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIVFEARFGEKSALKEKEVLEETSRIA 929
            |:.::.:........|.....|..|.|:.....|.:...|.:   .|::        |.:.||.|
plant   196 LNTVVPSAIQISVMTAHMIVASPALTLVSAMVIPSVALLIAY---LGDR--------LRKISRKA 249

  Fly   930 TETITQIRTVAGLRREEEL-----IKIYDKEV-ERYRHQILSRL---------KWRGLVNSLGKS 979
            .....|:.|..    .|.|     :|..:.|: |..|.|..:|.         |.:.|:..: ..
plant   250 QIASAQLSTYL----NEVLPAILFVKANNAEISESVRFQRFARADLDERFKKKKMKSLIPQI-VQ 309

  Fly   980 LMFFGYAVTLTYGGHMCADGKIKFETIMKISNTMLYGLFILAQSLAFTPAFNAALL---SANRMY 1041
            :|:.|.......|..:.|...:....|:....::.: |....|.|.  .|:|....   :..|::
plant   310 VMYLGSLSIFCVGAVILAGSSLSSSAIVSFVASLAF-LIDPVQDLG--KAYNELKQGEPAIERLF 371

  Fly  1042 EIIDRKPQ-IQSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSYPSRPHIKVLQNFNLDINQGQ 1105
            ::...:.: |:.||:.::::           |...|....::|.|... .:.||...||.|..|:
plant   372 DLTSLESKVIERPEAIQLEK-----------VAGEVELCDISFKYDEN-MLPVLDGLNLHIKAGE 424

  Fly  1106 TVALVGASGSGKSTCVQLLMRYYDPDEGKILIDQESIHHDMDLKTLRRRLGIVSQEPSLFEKSIA 1170
            ||||||.||.||:|.::||:|.|:|..|.|:||:..| .|:.|::||:.:|:|||:.:||..:||
plant   425 TVALVGPSGGGKTTLIKLLLRLYEPSSGSIIIDKIDI-KDIKLESLRKHVGLVSQDTTLFSGTIA 488

  Fly  1171 DNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQLSGGQKQRIAIARAMVRN 1235
            |||||.|.:..:.|:::..|||.|||.|||.:||..|:|.:|.:|:.||||||||:|||||:.:.
plant   489 DNIGYRDLTTGIDMKRVELAAKTANADEFIRNLPEGYNTGVGPRGSSLSGGQKQRLAIARALYQK 553

  Fly  1236 PKILLLDEATSALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNANVICVIQAGKIVE----- 1295
            ..||:|||||||||..||.:|::||:......|.|||||||.|:..|..:.:::.||:.|     
plant   554 SSILILDEATSALDSLSELLVREALERVMQDHTVIVIAHRLETVMMAQRVFLVERGKLKELNRSS 618

  Fly  1296 -QGSHSQLLAKNGI 1308
             ..:|...|...|:
plant   619 LLSTHKDSLTSAGL 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 189/664 (28%)
ABC_membrane <147..333 CDD:279056
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216
ABC_membrane 749..1019 CDD:279056 57/295 (19%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 109/239 (46%)
ABCB29NP_196011.1 MdlB 77..613 CDD:224055 172/579 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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