DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and ABCB18

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_189480.1 Gene:ABCB18 / 822468 AraportID:AT3G28390 Length:1225 Species:Arabidopsis thaliana


Alignment Length:1308 Identity:446/1308 - (34%)
Similarity:708/1308 - (54%) Gaps:121/1308 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SYTELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIVVYSELVAMFIERTLGQGTSSVTIGLSLFG 101
            |...:|.:..|.|::::..|.:.|.....:.||...:.|:|                   |:..|
plant     7 SIRSIFMHADGVDWMLMALGLIGAVGDGFITPIIFFICSKL-------------------LNNVG 52

  Fly   102 GGKILTNASYEEN--MQELRKDSVSFGILMTLNTLLMLFSGVYYVDAFNRLALKLTVRMRREFFK 164
            |      :|:::.  ||.:.|::|:...:...:.::....|..:.....|.|.|    ||.::.|
plant    53 G------SSFDDETFMQTVAKNAVALVYVACASWVICFIEGYCWTRTGERQAAK----MREKYLK 107

  Fly   165 ATLRQEIGWHDM--AKDQNFAVRITDNMEKIRSGIAENLGHYVEIMCDVIISVVLSFIYGWKLAL 227
            |.|||::|:.|:  ....:....::.:...|:..::|.|.:::......:.|.::.|:..|:|.:
plant   108 AVLRQDVGYFDLHVTSTSDVITSVSSDSLVIQDFLSEKLPNFLMNTSAFVASYIVGFLLLWRLTI 172

  Fly   228 AIVFYIPLTLVVNSAVAHYQGKLTGQEQSSYVRASSVVEEVIGAIRTVVAFGGERSESLRYDSLL 292
            ....:|.|.|:..........:::.:.:..|..|.|:.|:||.::|||.|||.|:....::.:.|
plant   173 VGFPFIILLLIPGLMYGRALIRISMKIREEYNEAGSIAEQVISSVRTVYAFGSEKKMIEKFSTAL 237

  Fly   293 KPALKAGKWKGAFSGL---SDTVMKAML-FITGAGSFWYGANLILYYRDPSIPIDEREYTPAVVM 353
            :.::|.|..:|...|:   |:.:..|:. |:|     |||:.:::.:......:.      :|::
plant   238 QGSVKLGLRQGLAKGIAIGSNGITYAIWGFLT-----WYGSRMVMNHGSKGGTVS------SVIV 291

  Fly   354 IVISGIIVSANQISRTSPFLETFAMARGSASAILDVIDRTSLIDPLSKAGKILNYGLKGAVEFRD 418
            .|..|.......:|....|.|.|.:    ...|:.||:|...||..:..|:||. ..:|.|||..
plant   292 CVTFGGTSLGQSLSNLKYFSEAFVV----GERIMKVINRVPGIDSDNLEGQILE-KTRGEVEFNH 351

  Fly   419 VFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQLLQRFYDPVFGQVLLDGEDVRKY 483
            |.|.||:|.:..:...|.:.|..|:||||||.||.||||.|.||||||||:.|::|:||..:.|.
plant   352 VKFTYPSRPETPIFDDLCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPIAGEILIDGLPINKL 416

  Fly   484 NIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDISE 548
            .:|||||.:.:|.||||||..||.|||..||.:|:..||.:||||:|||.||......|.|.:.|
plant   417 QVKWLRSQMGLVSQEPVLFATSIKENILFGKEDASMDEVVEAAKASNAHSFISQFPNSYQTQVGE 481

  Fly   549 KGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHSEKLVQAALDKACKGRTTLVVSHRLSA 613
            :||||||||:||||||||:|:.|.||||||||||||..||::||.|||.|..||||:|::||||.
plant   482 RGVQLSGGQKQRIAIARAIIKSPIILLLDEATSALDSESERVVQEALDNASIGRTTIVIAHRLST 546

  Fly   614 IRHAHRIVYIENGKAVEQGTHEELM-KLEGFYHKMVTVHSYDDSAEELLNELEEVAEIKERKMSY 677
            ||:|..|..:.||:.:|.|:||||: ||:|.|..:|.:...|:...:.::..|..|....:.:.|
plant   547 IRNADVICVVHNGRIIETGSHEELLEKLDGQYTSLVRLQQVDNKESDHISVEEGQASSLSKDLKY 611

  Fly   678 EVEPYQLGTRNSIVSLEKNAEFQMKNLNGLANITMNQEIDDPRVPSANFISTFFRILGWARPEWS 742
            ..:.:...|.::||.       ...||:             |: ...:.:.:|.|::...||||.
plant   612 SPKEFIHSTSSNIVR-------DFPNLS-------------PK-DGKSLVPSFKRLMSMNRPEWK 655

  Fly   743 FLIIGAICAGLYGVTMPVFSVVLAELYGSLAKPTDEEVLEQSASMAIISLVIGIAAGVVCYIQTF 807
            ..:.|.:.|.|:|...|::|.....:.......:.:::.|:  :...:.|.:|:|      :.||
plant   656 HALYGCLGAALFGAVQPIYSYSSGSMVSVYFLASHDQIKEK--TRIYVLLFVGLA------LFTF 712

  Fly   808 FFNLA--------GVWLTTRMRSKTFRCIMNQEMGWFDRKENSIGALSARLSGDAASVQGAIGFP 864
            ..|::        |.:||.|:|.:....|:..|:.|||:.|||.||:.:||:.||..|:..:|..
plant   713 LSNISQHYGFAYMGEYLTKRIRERMLGKILTFEVNWFDKDENSSGAICSRLAKDANMVRSLVGDR 777

  Fly   865 LSNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIVFE---ARFGEKSALKEKEVLEETS 926
            :|.::|..:....:.||....||..:::.:|..|.:|.....:   .:...::|:|.:   :|:|
plant   778 MSLLVQTISAVSITCAIGLVISWRFSIVMMSVQPVIVVCFYTQRVLLKSMSRNAIKGQ---DESS 839

  Fly   927 RIATETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRLKW-RGLVNSLGKSLMFFGYAVTLT 990
            ::|.|.::.|||:.....:|.:|.:. |.|:....:..:|..| .|::....:||:....|:...
plant   840 KLAAEAVSNIRTITAFSSQERIINLL-KMVQEGPRKDSARQSWLAGIMLGTSQSLITCVSALNFW 903

  Fly   991 YGGHMCADGKIKFETIMKISNTMLYGLF-----ILAQSLAFTPAFNAALLSANRMYEIIDRKPQI 1050
            |||.:.||||:..:..::|     :.:|     ::|::...|........:...::.::||...|
plant   904 YGGKLIADGKMMSKEFLEI-----FLIFASTGRVIAEAGTMTKDLVKGSDAVASVFAVLDRNTTI 963

  Fly  1051 QSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSYPSRPHIKVLQNFNLDINQGQTVALVGASGS 1115
            : ||        |...|....|:..:|:..::|:||:||.:.:.|||::||..|::.|:||.|||
plant   964 E-PE--------NPDGYVPKKVKGQISFSNVDFAYPTRPDVIIFQNFSIDIEDGKSTAIVGPSGS 1019

  Fly  1116 GKSTCVQLLMRYYDPDEGKILIDQESIHHDMDLKTLRRRLGIVSQEPSLFEKSIADNIGYGDTSR 1180
            ||||.:.|:.|:|||.:|.:.||...| ....|::||:.:.:|||||:||..:|.:||.||..|.
plant  1020 GKSTIISLIERFYDPLKGIVKIDGRDI-RSCHLRSLRQHIALVSQEPTLFAGTIRENIMYGGASN 1083

  Fly  1181 QVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQLSGGQKQRIAIARAMVRNPKILLLDEAT 1245
            ::...:||||||.||||:||.||...|||..|.:|.|||||||||||||||:::||.:|||||||
plant  1084 KIDESEIIEAAKAANAHDFITSLSNGYDTCCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEAT 1148

  Fly  1246 SALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNANVICVIQAGKIVEQGSHSQLLAK--NGI 1308
            ||||.|||.|||.||:....|||.:||||||||||..:.|.|::.|.:||.|:||.||||  .|.
plant  1149 SALDSQSESVVQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGA 1213

  Fly  1309 YSKLYRCQ 1316
            |..|...|
plant  1214 YFSLVSLQ 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 434/1257 (35%)
ABC_membrane <147..333 CDD:279056 47/191 (25%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 134/235 (57%)
ABC_membrane 749..1019 CDD:279056 70/286 (24%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 130/241 (54%)
ABCB18NP_189480.1 PTZ00265 22..1222 CDD:240339 442/1293 (34%)
ABC_membrane 27..295 CDD:279056 63/307 (21%)
ABC_MTABC3_MDL1_MDL2 347..585 CDD:213216 135/237 (57%)
ABC_membrane 661..927 CDD:279056 69/282 (24%)
ABC_MTABC3_MDL1_MDL2 980..1221 CDD:213216 130/241 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 90 1.000 Domainoid score I2655
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.790

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