DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and ABCB1

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_181228.1 Gene:ABCB1 / 818265 AraportID:AT2G36910 Length:1286 Species:Arabidopsis thaliana


Alignment Length:1351 Identity:464/1351 - (34%)
Similarity:726/1351 - (53%) Gaps:137/1351 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DADEATP------AAQKKKKTKEKAQPMVSYTELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIV 72
            |.|...|      ..::.||.:.:.   |::.||||:..|.||:::..|.|.||:.....|:.:.
plant     2 DNDGGAPPPPPTLVVEEPKKAEIRG---VAFKELFRFADGLDYVLMGIGSVGAFVHGCSLPLFLR 63

  Fly    73 VYSELVAMFIERTLGQGTSSVTIGLSLFGGGKILTNASYEENMQELRKDSVSFGILMTLNTLLML 137
            .:::||..|     |..:::|                  |:.|:|:.|.::.|          ::
plant    64 FFADLVNSF-----GSNSNNV------------------EKMMEEVLKYALYF----------LV 95

  Fly   138 FSGVYYVDAFNRLAL------KLTVRMRREFFKATLRQEIGWHD---MAKDQNFAVRITDNMEKI 193
            .....:..::..::.      :.|.:||.::.:|.|.|:|.:.|   ...|..||:. ||.: .:
plant    96 VGAAIWASSWAEISCWMWSGERQTTKMRIKYLEAALNQDIQFFDTEVRTSDVVFAIN-TDAV-MV 158

  Fly   194 RSGIAENLGHYVEIMCDVIISVVLSFIYGWKLALAIVFYIPLTLVVNSAVAHYQGKLTGQEQSSY 258
            :..|:|.||:::..|...:...::.|...|:|||..:..:||..|:.........||:.:.|.|.
plant   159 QDAISEKLGNFIHYMATFVSGFIVGFTAVWQLALVTLAVVPLIAVIGGIHTTTLSKLSNKSQESL 223

  Fly   259 VRASSVVEEVIGAIRTVVAFGGERSESLRYDSLLKPALKAGKWKGAFSGLSDTVMKAMLFITGAG 323
            .:|.::||:.:..||.|:||.||...|..|.|.||.|.|.|...|...|:.......::|...|.
plant   224 SQAGNIVEQTVVQIRVVMAFVGESRASQAYSSALKIAQKLGYKTGLAKGMGLGATYFVVFCCYAL 288

  Fly   324 SFWYGANLILYYRDPSIPIDEREYTPAVVMIVISGIIVSANQISRTSPFLETFAMARGSASAILD 388
            ..|||..|:.::..          ...:.:..:..:::....:.:::|.:..||.|:.:|:.|..
plant   289 LLWYGGYLVRHHLT----------NGGLAIATMFAVMIGGLALGQSAPSMAAFAKAKVAAAKIFR 343

  Fly   389 VIDRTSLIDPLSKAGKILNYGLKGAVEFRDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGC 453
            :||....|:..|::|..|: .:.|.||.::|.|.||:|.||.:|....:.|..|:|:||||.||.
plant   344 IIDHKPTIERNSESGVELD-SVTGLVELKNVDFSYPSRPDVKILNNFCLSVPAGKTIALVGSSGS 407

  Fly   454 GKSTCIQLLQRFYDPVFGQVLLDGEDVRKYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEAT 518
            ||||.:.|::|||||..|||||||:|::...::|||..|.:|.|||.||..||.|||..|:|:|.
plant   408 GKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIGLVSQEPALFATSIKENILLGRPDAD 472

  Fly   519 QKEVEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSAL 583
            |.|:|:||:.||||.|||.|..|:||.:.|:|:||||||:||||||||:::.|.|||||||||||
plant   473 QVEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSAL 537

  Fly   584 DYHSEKLVQAALDKACKGRTTLVVSHRLSAIRHAHRIVYIENGKAVEQGTHEELMKL--EGFYHK 646
            |..||||||.|||:...|||||:::||||.||.|..:..::.|...|.|||:||...  .|.|.|
plant   538 DSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAK 602

  Fly   647 MVTVHSYDDSAEELLNELEEVAEIKERKMSYEVEPYQLGTRNSIVS--LEKNAEF----QMKNLN 705
            ::          ::.....|.|....||.|....    ..|||:.|  :.:|:.:    ..:.|:
plant   603 LI----------KMQEAAHETAMSNARKSSARPS----SARNSVSSPIMTRNSSYGRSPYSRRLS 653

  Fly   706 GLANITMNQEIDDPRVPS-----------ANFISTFFRILGWARPEWSFLIIGAICAGLYGVTMP 759
            ..:....:..||....|:           ||   :|:|:.....|||.:.::|::.:.:.|....
plant   654 DFSTSDFSLSIDASSYPNYRNEKLAFKDQAN---SFWRLAKMNSPEWKYALLGSVGSVICGSLSA 715

  Fly   760 VFSVVLAELYGSLAKPTDEEVLEQSASMAIISLVIGIAAGVVCYIQTFFFNLAGVWLTTRMRSKT 824
            .|:.||:.:......|..|.:::|......:.:.:..||.|...:|..|:::.|..||.|:|.|.
plant   716 FFAYVLSAVLSVYYNPDHEYMIKQIDKYCYLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKM 780

  Fly   825 FRCIMNQEMGWFDRKENSIGALSARLSGDAASVQGAIGFPLSNIIQAFTNFICSIAIAFPYSWEL 889
            ...::..||.|||::||....::|||:.||.:|:.|||..:|.|:|.....:.:....|...|.|
plant   781 LSAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRL 845

  Fly   890 ALICLSTSPFMVASIVFEARF-----GEKSALKEKEVLEETSRIATETITQIRTVAGLRREEELI 949
            ||:.::..|.:||:.|.:..|     |:..|...|     .:::|.|.|..:||||....|.:::
plant   846 ALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAK-----GTQLAGEAIANVRTVAAFNSEAKIV 905

  Fly   950 KIYDKEVERYRHQILSRLKWRGLVNSLGKSL----MFFGYAVTLTYGGHMCADGKIKFETIMKIS 1010
            ::|...:|    ..|.|..|:|.:...|..:    ::..||:.|.|...:...|...|...:::.
plant   906 RLYTANLE----PPLKRCFWKGQIAGSGYGVAQFCLYASYALGLWYASWLVKHGISDFSKTIRVF 966

  Fly  1011 NTMLYGLFILAQSLAFTPAFNAALLSANRMYEIIDRKPQIQ--SPESFEIQQNGNGTAYKTNVVQ 1073
            ..::......|::|...|.|.....:...::|::|||.:|:  .|::..:.....|.        
plant   967 MVLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDPDTTPVPDRLRGE-------- 1023

  Fly  1074 QGVSYRGLNFSYPSRPHIKVLQNFNLDINQGQTVALVGASGSGKSTCVQLLMRYYDPDEGKILID 1138
              |..:.::|||||||.|::.::.:|....|:|:||||.||.|||:.:.|:.|:|:|..|:::||
plant  1024 --VELKHIDFSYPSRPDIQIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVMID 1086

  Fly  1139 QESIHHDMDLKTLRRRLGIVSQEPSLFEKSIADNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSL 1203
            .:.| ...:||.:|:.:.||.|||.||..:|.:||.||...  ....:||:||.:|:||:||.:|
plant  1087 GKDI-RKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHEC--ATEAEIIQAATLASAHKFISAL 1148

  Fly  1204 PAQYDTVLGSKGTQLSGGQKQRIAIARAMVRNPKILLLDEATSALDFQSERVVQQALDSACSGRT 1268
            |..|.|.:|.:|.|||||||||||||||:||..:|:||||||||||.:|||.||:|||.||||||
plant  1149 PEGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQACSGRT 1213

  Fly  1269 CIVIAHRLSTIQNANVICVIQAGKIVEQGSHSQLLAKN---GIYSKLYRCQ 1316
            .||:|||||||:||:||.||..||:.||||||.|| ||   |||:::.:.|
plant  1214 SIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLL-KNHPDGIYARMIQLQ 1263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 443/1271 (35%)
ABC_membrane <147..333 CDD:279056 56/194 (29%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 131/236 (56%)
ABC_membrane 749..1019 CDD:279056 71/278 (26%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 131/242 (54%)
ABCB1NP_181228.1 PTZ00265 43..1264 CDD:240339 451/1307 (35%)
ABC_membrane 49..319 CDD:279056 70/314 (22%)
ABC_MTABC3_MDL1_MDL2 368..607 CDD:213216 131/248 (53%)
ABC_membrane 705..970 CDD:279056 71/273 (26%)
ABC_MTABC3_MDL1_MDL2 1024..1263 CDD:213216 131/242 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 180 1.000 Domainoid score I1042
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.790

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