DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10226 and Hmt-1

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_650503.1 Gene:Hmt-1 / 41925 FlyBaseID:FBgn0038376 Length:866 Species:Drosophila melanogaster


Alignment Length:703 Identity:191/703 - (27%)
Similarity:312/703 - (44%) Gaps:183/703 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 FVAAFLQS-LVFPIAIVVYSELVAMFIERTLGQGTSSVTIGLSLFGGGKILTNASYEENMQELR- 119
            ||..||.| |:|.:.:.....:......:.|...|::.:       .|.:.|.:::....::|| 
  Fly   177 FVTRFLCSLLIFVLGLKAPGIMAPYNPHQRLDNDTANES-------QGNVQTGSAFRNGWRKLRT 234

  Fly   120 -------KDSVSFG-------ILMTLNTLLMLFSGVY---YVDA--------------------- 146
                   |.:::..       ||:....::.||..:|   .||:                     
  Fly   235 VFPYLWPKKNIALQIAVIVCIILLLAGRVIKLFLPIYRKKLVDSLTIAPIVFRWDFVLIYVALSF 299

  Fly   147 -----------FNRLALKLTVRMRR--------EFFKATLRQEIGWHDMAKDQNFAVRITDNMEK 192
                       ||.|...|.:|:::        |.|:...:..:.|| :.:.....:|:.|.   
  Fly   300 LQGGGTGSMGLFNNLRTFLWIRVQQYTTREIEIELFRHLHQLSLRWH-LQRKTGEVLRVMDR--- 360

  Fly   193 IRSGIAENLGHYV-----EIMCDVIISVVLSFIYGWKLALAIVFYIPLTLVVNSAVA------HY 246
             .:....||.:|:     ..:.|::::|.. |:|.:.....::.::.:.|.:.|.:|      .|
  Fly   361 -GTDSINNLLNYIVFSIAPTILDLLVAVAY-FVYAFNWWFGLIVFLTMFLYIASTIAITEWRTKY 423

  Fly   247 QGK--LTGQEQSSYVRASSVVEEVIGAIRTVVAFGGE-------RSESLRYD----------SLL 292
            |.:  |...||    ||.||  :.:....||..:|.|       |...|:|.          ::|
  Fly   424 QRRMNLADNEQ----RARSV--DSLLNFETVKYYGAEHYEVDCYREAILKYQKEEFLSMLTLNML 482

  Fly   293 KPALKAGKWKGAFSG-----------LSDTVMKAMLFITGAGSF-----WYGANLILYYRDPSIP 341
            ..|.......|..:|           .:.||...:||.|.....     |:|.    |||     
  Fly   483 NTAQNIILCLGLLAGSLLCVYLVVHHQTLTVGDFVLFSTYLMELYMPLNWFGT----YYR----- 538

  Fly   342 IDEREYTPAVVMIVISGIIVSANQISRTSPFLETFAMARGSASAILDVI-DRTSLID-----PLS 400
                              .:..|.:...:.|               |:: :...::|     ||.
  Fly   539 ------------------AIQKNFVDMENMF---------------DLLKEEEEIVDAPGCSPLL 570

  Fly   401 KAGKILNYGLKGAVEFRDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQLLQRF 465
            .||        |.:||.:|.|.|...:  ||||.::..|..|:|||:|||||.||||.::||.||
  Fly   571 TAG--------GGIEFSNVTFGYSPEK--IVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRF 625

  Fly   466 YDPVFGQVLLDGEDVRKYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEVEDAAKAAN 530
            ||...|.:|:||::::....:.||..|.||.|:.|||..:|..||.:.|..|:.:.|.:||:||:
  Fly   626 YDVQTGAILIDGQNIKLVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAAD 690

  Fly   531 AHDFIIALHKGYDTDISEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHSEKLVQAAL 595
            .|:.|:...:.|:|.:.|:|::||||::||:||||.|::.|.|:||||||||||.|:|:.:||||
  Fly   691 IHERILGFPEKYETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAAL 755

  Fly   596 DKACKGRTTLVVSHRLSAIRHAHRIVYIENGKAVEQGTHEEL-MKLEGFYHKM 647
            .:.|..|||::|:||||.|.||..|:.::.|...|:|.|||| ::.:|.|..|
  Fly   756 ARVCANRTTIIVAHRLSTIIHADEILVLQQGSIAERGRHEELVLREDGIYADM 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 184/678 (27%)
ABC_membrane <147..333 CDD:279056 48/239 (20%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 110/235 (47%)
ABC_membrane 749..1019 CDD:279056
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216
Hmt-1NP_650503.1 MTABC_N 3..241 CDD:292803 13/70 (19%)
ABC_membrane 255..530 CDD:279056 53/286 (19%)
ATM1 314..811 CDD:227590 168/559 (30%)
ABCC_ATM1_transporter 576..812 CDD:213220 110/235 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I2340
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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