DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and Abcb5

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_006240775.1 Gene:Abcb5 / 314537 RGDID:1566342 Length:1255 Species:Rattus norvegicus


Alignment Length:1287 Identity:484/1287 - (37%)
Similarity:732/1287 - (56%) Gaps:85/1287 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIVVYSELVAMFIERTLGQGTSSVTIGLSLFGGGK 104
            |:||:....|.:::..|.:|:.:.....|:..:|..|:...||...|.|                
  Rat    36 EIFRFADNLDIVLMTLGILASMINGATVPLMSLVLGEISDHFINGCLVQ---------------- 84

  Fly   105 ILTNASYEEN----MQELRKDSVSFGILMTLNTL----LMLFSGVYYVDAFNRLALKLTVRMRRE 161
              ||.:..:|    .::|.:|.    |::||..:    ..|..|...:..:...|.:.|.|:|::
  Rat    85 --TNKTKYQNCSQSQEKLNEDI----IMLTLYYVGIGAAALVLGYVQISFWVITAARQTTRIRKQ 143

  Fly   162 FFKATLRQEIGWHDMAKDQNFAVRITDNMEKIRSGIAENLGHYVEIMCDVIISVVLSFIYGWKLA 226
            ||.:.|.|:|.|.|.........|:..::.|:..||.:.:....:.:....|.:|:|.|..|||:
  Rat   144 FFHSILAQDISWFDGTDICELNTRMNGDISKLCDGIGDKIPLMFQNISGFSIGLVISLIKSWKLS 208

  Fly   227 LAIVFYIPLTLVVNSAVAHYQGKLTGQEQSSYVRASSVVEEVIGAIRTVVAFGGERSESLRYDSL 291
            |||:...||.:..::..:.....||.:|..:|.:|.:|.||.:.:||||.|||.:..|..||...
  Rat   209 LAILSTSPLIMAASALCSRMVISLTSKELDAYSKAGAVAEEALSSIRTVTAFGAQEKEIQRYTQN 273

  Fly   292 LKPALKAGKWKGAFSGLSDTVMKAMLFITGAG--SFWYGANLILYYRDPSIPIDEREYTPAVVMI 354
            ||.|..||..:...|.||  :.....|:.||.  :||||.:|| :..:|.       ||...::.
  Rat   274 LKDAKDAGIKRAIASKLS--LGAVYFFMNGAYGLAFWYGTSLI-FGGEPG-------YTVGTILA 328

  Fly   355 VISGIIVSANQISRTSPFLETFAMARGSASAILDVIDRTSLIDPLSKAGKILNY---GLKGAVEF 416
            |...:|.|:..|...:|.||||.:|||:|..|..|||:...||..|.||    |   .::|.:||
  Rat   329 VFFSVIHSSYCIGSVAPHLETFTIARGAAFNIFHVIDKKPNIDNFSTAG----YKPESIEGNIEF 389

  Fly   417 RDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQLLQRFYDPVFGQVLLDGEDVR 481
            ::|.|.||:|....:|:|.|:.::.|:|||||||||.||:|.:|||||.|||..|.:.:|..|:|
  Rat   390 KNVSFSYPSRPSAKILKGFNLKIKSGETVALVGPSGSGKTTTVQLLQRLYDPEEGCITVDENDIR 454

  Fly   482 KYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDI 546
            ..|::..|..|.||.||||||..:||.||:.|:...:::|:|.||:.|||:|||:|..|.::|.:
  Rat   455 TQNVRHYREQIGVVSQEPVLFGTTIGNNIKFGREGVSEEEMEQAAREANAYDFIMAFPKKFNTLV 519

  Fly   547 SEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHSEKLVQAALDKACKGRTTLVVSHRL 611
            .|||.|:||||:|||||||||::.||||:|||||||||..||.||||||:||.||||||||:|||
  Rat   520 GEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESLVQAALEKASKGRTTLVVAHRL 584

  Fly   612 SAIRHAHRIVYIENGKAVEQGTHEELMKLEGFYHKMVTVHSYDDSAEELLNELEEVAEIKERKMS 676
            |.||.|..||.:::|:.||:|.|.|||..:|.|:.:.           :..::::|.|..|.:..
  Rat   585 STIRGADLIVTMKDGEVVEKGIHAELMAKQGLYYSLA-----------VAQDIKKVDEQMESRTC 638

  Fly   677 YEVEPYQLGTRNSIVSLEKNAEFQMKNLNGLANITMNQEIDDPRVPSANFISTFFRILGWARPEW 741
            ........|:..::.|.:.....|.:      ....:|:...|.|       :..:|...::.||
  Rat   639 SAAGNASNGSLCNVNSAKSPCTDQFE------EAVPHQKTTLPEV-------SLLKIFKLSKSEW 690

  Fly   742 SFLIIGAICAGLYGVTMPVFSVVLAELYGSLAKPTDEEVLEQSASM-AIISLVIGIAAGVVCYIQ 805
            .|:::|.:.:.|.|...|.||::..:|. ::.:..::..|:|.|.: :::.:|:||.|.|...:|
  Rat   691 PFVVLGTLASALNGSVHPAFSIIFGKLV-TMFEDKNKTTLKQDAELYSMMLVVLGIVALVTYLMQ 754

  Fly   806 TFFFNLAGVWLTTRMRSKTFRCIMNQEMGWFDRKENSIGALSARLSGDAASVQGAIGFPLSNIIQ 870
            ..|:..|...|..|:|...|:.::.|:|.|:|.|:||.|||:..|:.|.|.::||....|..|.|
  Rat   755 GLFYGRAEEILAMRLRHSAFKAMLYQDMAWYDEKDNSTGALTTTLAVDVAQIRGAATSRLGIITQ 819

  Fly   871 AFTNFICSIAIAFPYSWELALICLSTSPFMVASIVFEARFGEKSALKEKEVLEETSRIATETITQ 935
            ..||...||.|:|.|.||:.|:.||.:|.:..:.:.:.......|.|:|:.|:...:||||.:..
  Rat   820 DVTNMSLSILISFVYGWEMTLLILSFAPILAVTGMIQTAAMAGFANKDKQELKRAGKIATEAVEN 884

  Fly   936 IRTVAGLRREEELIKIYDKEVERYRHQILSRLKWRGLVNSLGKSLMFFGYAVTLTYGGHMCADGK 1000
            ||||..|.||:....:|::.:.......|.|....|...::..:.:.|.:|....:|.::...|:
  Rat   885 IRTVVSLTREKAFEHMYEETLRTQHRNALKRAHITGSCYAVSHAFVHFAHAAGFRFGAYLIQAGR 949

  Fly  1001 IKFETIMKISNTMLYGLFILAQSLAFTPAFNAALLSANRMYEIIDRKPQIQSPESFEIQQNGNGT 1065
            :..|.:..:...:.||...:.::|.:.|.::.|...|..::.::..||.|.|     ..|||.  
  Rat   950 MTPEGMFIVFTAIAYGAMAIGETLVWAPEYSKAKAGAAHLFALLKNKPSIDS-----CSQNGE-- 1007

  Fly  1066 AYKTNVVQQGVSYRGLNFSYPSRPHIKVLQNFNLDINQGQTVALVGASGSGKSTCVQLLMRYYDP 1130
              |.:..:..:.:|.::|.||.||.:.|||:.:|.|.:|:|||.||:||.|||||||||.|:|||
  Rat  1008 --KPDACEGNLEFREVSFFYPCRPEVPVLQDMSLSIEKGKTVAFVGSSGCGKSTCVQLLQRFYDP 1070

  Fly  1131 DEGKILIDQESIHHDMDLKTLRRRLGIVSQEPSLFEKSIADNIGYGDTSRQVPMQQIIEAAKMAN 1195
            .:|::|:|...: .:::::.||.:..||||||.||..|||:||.|||.||.||:::|.|.|..||
  Rat  1071 MKGQVLLDGVDV-KELNVQWLRSQTAIVSQEPVLFNCSIAENIAYGDNSRMVPLEEIKEVADAAN 1134

  Fly  1196 AHEFIMSLPAQYDTVLGSKGTQLSGGQKQRIAIARAMVRNPKILLLDEATSALDFQSERVVQQAL 1260
            .|.||..||.:|.|.:|.:|..||||||||:|||||::|.||||||||||||||.:||::|||||
  Rat  1135 IHSFIEGLPGKYSTQVGLRGMHLSGGQKQRLAIARALLRKPKILLLDEATSALDNESEKMVQQAL 1199

  Fly  1261 DSACSGRTCIVIAHRLSTIQNANVICVIQAGKIVEQGSHSQLLAKNGIYSKL 1312
            |.|..||||:|:||||||||||::|.|:|.|:|.|||:|.:||.....|.||
  Rat  1200 DKARRGRTCLVVAHRLSTIQNADMIVVLQNGRIKEQGTHQELLRNGETYFKL 1251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 473/1243 (38%)
ABC_membrane <147..333 CDD:279056 61/187 (33%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 131/234 (56%)
ABC_membrane 749..1019 CDD:279056 78/270 (29%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 137/237 (58%)
Abcb5XP_006240775.1 PTZ00265 48..1252 CDD:240339 480/1275 (38%)
ABC_membrane 53..334 CDD:279056 84/312 (27%)
ABC_MTABC3_MDL1_MDL2 387..624 CDD:213216 131/247 (53%)
ABC_membrane 697..963 CDD:279056 76/266 (29%)
ABC_MTABC3_MDL1_MDL2 1017..1254 CDD:213216 137/236 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 207 1.000 Domainoid score I2784
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.730

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