DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10226 and Tap1

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_114444.2 Gene:Tap1 / 24811 RGDID:3817 Length:725 Species:Rattus norvegicus


Alignment Length:624 Identity:187/624 - (29%)
Similarity:307/624 - (49%) Gaps:78/624 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DYLVLLSGFVAAFLQSLVFPIAIVVYSELVAMFIERTLGQGTSSVTIGLSLFGGGKILTNASYEE 113
            |.|..:.||:.:....|...:.:::.|.|..|.|....|:.|..:.         :..|..|:..
  Rat   148 DMLCRMLGFLDSKKGRLHLVLVLLILSCLGEMAIPFFTGRITDWIL---------QDKTAPSFAR 203

  Fly   114 NMQELRKDSVSFGILMTLNTLLMLFSGVYYVDAFNRLAL-KLTVRMRREFFKATLRQEIGWHDMA 177
            ||..:        .::|:.:..:.|:|    |....:.: .:..|:..|.|:|.|.||.|:....
  Rat   204 NMWLM--------CILTVASTALEFAG----DGIYNITMGHMHSRVHGEVFRAVLHQETGFFLKN 256

  Fly   178 KDQNFAVRITDNMEKIRSGIAENLGHYV----EIMCDVIISVVLSF-IYG-WKLALAIVFYIPLT 236
            ...:...|:|::...:...|::.|..::    ..:|      :|:| |:| :.|.:..:..:||.
  Rat   257 PTGSITSRVTEDTSNVCESISDKLNLFLWYLGRGLC------LLAFMIWGSFYLTVVTLLSLPLL 315

  Fly   237 LVVNSAVAHYQGKLTGQEQSSYVRASSVVEEVIGAIRTVVAFGGERSESLRYDSLLKPALKAGK- 300
            .::...:......|..:.|.|..:::.|..|.:.|:.||.:|..|..|:.::...|:......| 
  Rat   316 FLLPRRLGKVYQSLAVKVQESLAKSTQVALEALSAMPTVRSFANEEGEAQKFRQKLEEMKPLNKK 380

  Fly   301 ---------WKGAFSGLSDTV----MKAMLFITGAGSFWYGANLILYYRDPSIPIDEREYTPAVV 352
                     |..:.||:...|    :...|.:.||.|.....:.:||         :.::|.||.
  Rat   381 EALAYVTEVWTMSVSGMLLKVGILYLGGQLVVRGAVSSGNLVSFVLY---------QLQFTRAVE 436

  Fly   353 MIVISGIIVSANQISRTSPFLETFAMARGSASAILDVIDRTSLIDPLSKAGKILNYGLKGAVEFR 417
            :::               ....:...:.|::..|.:.:|||. ..|||  |.:....:||.|:|:
  Rat   437 VLL---------------SIYPSMQKSVGASEKIFEYLDRTP-CSPLS--GSLAPLNMKGLVKFQ 483

  Fly   418 DVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKSTCIQLLQRFYDPVFGQVLLDGEDVRK 482
            ||.|.||...:|.||:||...:..|:..|||||:|.||||...|||..|.|..|:||||||.:.:
  Rat   484 DVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGELLVQ 548

  Fly   483 YNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEA-TQKEVEDAAKAANAHDFIIALHKGYDTDI 546
            |:..:|.:.:|.|||||:||..|..|||.:|.... |.:|:...|..:.|||||....:||||::
  Rat   549 YDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEV 613

  Fly   547 SEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHSEKLVQAALDKACK--GRTTLVVSH 609
            .|.|.||||||||.:|:|||||::|::|:||:||||||..::..||..|.::.:  .||.|:::.
  Rat   614 GETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLLYESPEWASRTVLLITQ 678

  Fly   610 RLSAIRHAHRIVYIENGKAVEQGTHEELMKLEGFYHKMV 648
            :||....||.|::::.|...|||||.:||:..|.|..||
  Rat   679 QLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSMV 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 179/592 (30%)
ABC_membrane <147..333 CDD:279056 41/206 (20%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 111/238 (47%)
ABC_membrane 749..1019 CDD:279056
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216
Tap1NP_114444.2 3a01208 2..717 CDD:273363 185/622 (30%)
ABC_membrane 177..435 CDD:279056 56/293 (19%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 352..397 9/44 (20%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 430..464 8/49 (16%)
P-loop_NTPase 469..697 CDD:304359 103/227 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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