DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and pgp-4

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001257142.1 Gene:pgp-4 / 181327 WormBaseID:WBGene00003998 Length:1280 Species:Caenorhabditis elegans


Alignment Length:1335 Identity:456/1335 - (34%)
Similarity:717/1335 - (53%) Gaps:95/1335 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VPAADADEATPAAQK--KKKTKEKAQPMVSYTELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIV 72
            ||...|.|......:  |||.|.::....|.:.|||:....|||:||.|.|.:.....:.|...:
 Worm    13 VPMKIASEHVELGSRPDKKKKKSRSSQGNSLSNLFRHSGCADYLLLLGGLVLSAANGALLPFNSL 77

  Fly    73 VYSELVAMFIERTLGQGTSSVTIGLSLFGGGKILTNASYEENMQELRKDSVSFGI----LMTLNT 133
            ::             :|.::|     |..|.....|.:::       .|:.|.||    |:....
 Worm    78 IF-------------EGITNV-----LMKGEAQWQNGTFD-------YDTFSSGIQHYCLLYFLL 117

  Fly   134 LLMLFSGVYYVDA-FNRLALKLTVRMRREFFKATLRQEIGWHDMAKDQNFAVRITDNMEKIRSGI 197
            .:::|:..|:.:| ...:|.:....:|:...::.|||:..|.|.........:::..:|||:.||
 Worm   118 GVLMFTCTYFSNACLFTMAERRLYCIRKHLLQSVLRQDAKWFDENTVGGLTQKMSSGIEKIKDGI 182

  Fly   198 AENLGHYVEIMCDVIISVVLSFIYGWKLALAIVFYIPLTLVVNSAVAHYQGKLTGQEQSSYVRAS 262
            .:.:|..|..:...|..|.|.|...|:|.|.::..:||.|......|.:..:.|..|.|:|..|.
 Worm   183 GDKIGVLVSGIATFISGVALGFYMCWQLTLVMLVTVPLQLGSMYLSAKHLNRATKNEMSAYSSAG 247

  Fly   263 SVVEEVIGAIRTVVAFGGERSESLRYDSLLKPALKAGKWKGAFSGLSDTVMKAMLFITGAGSFWY 327
            .:..|||..||||:||..:..|..||.:.|..|.|.|..|.....|...:...::|:..||:|||
 Worm   248 GMANEVIAGIRTVIAFNAQPFEIERYGAQLAKARKMGIRKAIVLALCSAMPLFLMFVLMAGAFWY 312

  Fly   328 GANLILYYRDPSIPIDEREYTPAVVMIVISGIIVSANQISRTSPFLETFAMARGSASAILDVIDR 392
            ||.|..|          ...|......|...:|:...::...:|.:.....||.:.:.|..|||.
 Worm   313 GAILTSY----------GVATSGTTFGVFWAVILGTRRLGEAAPHMGAITGARLAVNDIFKVIDH 367

  Fly   393 TSLIDPLSKAGKILNYGLKGAVEFRDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKST 457
            ...|:...:.|:..: .:.|.:.|.::.|.||.|.||.:|:|::..|..|:|:||||.|||||||
 Worm   368 EPEINCTKQEGRRPD-KVNGKLVFDNIQFTYPTRPDVKILKGVSFEVNPGETIALVGHSGCGKST 431

  Fly   458 CIQLLQRFYDPVFGQVLLDGEDVRKYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKEV 522
            .|.||.|||:...|.:.|||..:..|||:||||.|.:|.|||::|..::.||:|.|....|.|::
 Worm   432 SIGLLMRFYNQCAGSIKLDGIPIEDYNIQWLRSTIGIVQQEPIIFLATVAENVRMGDDSITDKDI 496

  Fly   523 EDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYHS 587
            |:|.:.|||||||..|.:||:|.|....|||||||:||:|||||::::|:||||||||||||..|
 Worm   497 ENACRQANAHDFIGKLSEGYNTVIGAGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTES 561

  Fly   588 EKLVQAALDKACKGRTTLVVSHRLSAIRHAHRIVYIENGKAVEQGTHEELMKLEGFYHKMVTVHS 652
            |::||.|||||.:|||||.::||||.||:|.:|:..:.|...|:|.|::|::..|.|..||....
 Worm   562 ERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQGLIPERGIHDQLIRQNGIYANMVRAQE 626

  Fly   653 YDDSAEELLNELEEVAEIKERKMSYEVEPYQLGTRNSIVSLEKNAEFQMKNLNGLANITMNQEID 717
            .:.:.::...:.:|:.|.....:|..:...:...|.|...|..:..|....|:..:.:. :.|::
 Worm   627 IEKAKDDTTQDDDELVEEDNYSISRRLSTSEEELRKSKSLLRDSTRFSQSMLSVTSQVP-DWEME 690

  Fly   718 DPR---VPSANFISTFFRILGWARPEWSFLIIGAICAGLYGVTMPVFSVVLAELYGSLAKPTDEE 779
            ..|   :......::...|..:|:||...::|..|...:.|:|.|.||||..:|:...|:..::.
 Worm   691 SAREEMIEEGAMEASMMDIFRFAKPEKMNIVIALIFTLIRGITWPAFSVVYGQLFKVFAEGGEDL 755

  Fly   780 VLEQSASMAIIS----LVIGIAAGVVCYIQTFFFNLAGVWLTTRMRSKTFRCIMNQEMGWFDRKE 840
            .:.     |:||    :::.:.:.|..:|........|..:::|:|...|:.||.|:..:||..:
 Worm   756 PVN-----ALISSLWFVLLAVTSAVTTFISGSLLGKTGETMSSRLRMDVFKNIMQQDATYFDDPK 815

  Fly   841 NSIGALSARLSGDAASVQGAIGFPLSNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIV 905
            :::|.|::||:.|:.:||.||...|:.::....:....||:||.:.|.:|.|.|.|:..:|.:..
 Worm   816 HNVGNLTSRLATDSQNVQAAIDHRLAEVLNGVVSLFTGIAVAFWFGWSMAPIGLITALLLVIAQS 880

  Fly   906 FEARFGEKSALKEKEVLEETSRIATETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRLKWR 970
            ..|::.:....|:.|...|.|||.||:|:..:||..|.::|.:...:....:..|.:..::..|:
 Worm   881 AVAQYLKYRGPKDMESAIEASRIVTESISNWKTVQALTKQEYMFHAFTAASKNPRKRAFTKGLWQ 945

  Fly   971 GLVNSLGKSLMFFGYAVTLTYGGHMCADGKIKFETIMKISN--TMLYGLFILAQSL--------- 1024
            .|..:|..|...:.:|:...:|             :..|||  |..:.:|.:.::|         
 Worm   946 SLSFALAGSFFLWNFAIAYMFG-------------LWLISNNWTTPFAVFQVIEALNMASMSVMM 997

  Fly  1025 --AFTPAFNAALLSANRMYEIIDRKPQIQSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSYPS 1087
              ::.|.:..|.:||..|:.:|.:|.:|          :..|...:|..::..:|.:|:.|:||:
 Worm   998 AASYFPEYVRARISAGIMFTMIRQKAKI----------DNRGLTGETPDIRGDISMKGVYFAYPN 1052

  Fly  1088 RPHIKVLQNFNLDINQGQTVALVGASGSGKSTCVQLLMRYYDPDEGKILIDQESIHHDMDLKTLR 1152
            |....:|.|||:....|:||||||.||.||||.:||:.||||...|.:.||...| .|:.:|.||
 Worm  1053 RNRQLILNNFNMSAQFGETVALVGPSGCGKSTSIQLIERYYDAICGAVKIDDHDI-RDISVKHLR 1116

  Fly  1153 RRLGIVSQEPSLFEKSIADNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQ 1217
            ..:.:|.|||:||..:|.:||.||  ...|..:|:.:||.:||.|.|:.:||..|||.:|:.|.:
 Worm  1117 HNIALVGQEPTLFNLTIRENITYG--LENVSQEQVEKAATLANIHSFVENLPEGYDTSVGASGGR 1179

  Fly  1218 LSGGQKQRIAIARAMVRNPKILLLDEATSALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNA 1282
            ||||||||||||||:|||||||||||||||||.:||::||:|||.|..||||:||||||||||||
 Worm  1180 LSGGQKQRIAIARAIVRNPKILLLDEATSALDTESEKIVQEALDKARLGRTCVVIAHRLSTIQNA 1244

  Fly  1283 NVICVIQAGKIVEQGSHSQLLAKNGIYSKLYRCQT 1317
            :.|.|.:.||.:|:|:|..|||:.|:|.:|...|:
 Worm  1245 DKIIVCRNGKAIEEGTHQTLLARRGLYYRLVEKQS 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 434/1254 (35%)
ABC_membrane <147..333 CDD:279056 57/185 (31%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 123/234 (53%)
ABC_membrane 749..1019 CDD:279056 69/275 (25%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 131/239 (55%)
pgp-4NP_001257142.1 ABC_membrane 65..338 CDD:279056 75/307 (24%)
PTZ00265 68..1276 CDD:240339 436/1275 (34%)
ABC_MTABC3_MDL1_MDL2 389..625 CDD:213216 124/235 (53%)
ABC_membrane 724..993 CDD:279056 71/286 (25%)
ABC_MTABC3_MDL1_MDL2 1041..1278 CDD:213216 131/239 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I4926
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2081
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.880

Return to query results.
Submit another query.