DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10226 and Abcc2

DIOPT Version :9

Sequence 1:NP_648040.1 Gene:CG10226 / 38725 FlyBaseID:FBgn0035695 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_038834.2 Gene:Abcc2 / 12780 MGIID:1352447 Length:1543 Species:Mus musculus


Alignment Length:1387 Identity:307/1387 - (22%)
Similarity:572/1387 - (41%) Gaps:256/1387 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KKKKTKEKAQPMVSYTELFRYIAGWDYLVLLSGFVAAFLQSLVFPIAIVVYSELVAMFIERTLGQ 88
            ||||.|.:|......:.|.:.:....|:|:|..|:.    .|...|.:.:..:|:...|      
Mouse   291 KKKKKKSEATKDFPKSWLVKALFKTFYVVILKSFIL----KLAHDILLFLNPQLLKFLI------ 345

  Fly    89 GTSSVTIGLSLFGGGKILTNASYEENMQELRKDSVS-------FGILMTLNTLLMLFSGVYYVDA 146
                          |.:              ||..|       :.|||...||:..|    ::..
Mouse   346 --------------GFV--------------KDPDSYPWVGYIYAILMFSVTLIQSF----FLQC 378

  Fly   147 FNRLALKLTVRMRREFFKATLRQEIGWHDMAKDQNFAVRITDNMEKIRSGIAENLGHYVEIMCDV 211
            :.:....|.:.:|.....:..::.:...::|:.| :.:..|.|:..:.|....::.:|:.::...
Mouse   379 YFQFCFVLGMTVRTTIIASVYKKALTLSNLARRQ-YTIGETVNLMSVDSQKLMDVTNYIHLLWSS 442

  Fly   212 IISVVLSFIYGWK----LALAIVFYIPLTLVVNSAVAHYQGKLTGQEQSSYVRASSVVEEVIGAI 272
            ::.:.||..:.|:    ..||.|..:.|.:.||..:|....|:..|...:..:...::.|::..|
Mouse   443 VLQIALSIFFLWRELGPSILAGVGLMVLLVPVNGVLATKIRKIQVQNMKNKDKRLKIMNEILSGI 507

  Fly   273 RTVVAFGGERSESLRYDSLLKPALKAGKWKGAFSGLSDTVMKAMLFITGAGSFWYGANLILYYRD 337
            :.:..|..|.|...:.:|:.|..|:.   ...||.| .|::..:|.:|.........::.:....
Mouse   508 KILKYFAWEPSFKEQVNSIRKKELRN---LLRFSQL-QTILIFILHLTPTLVSVITFSVYVLVDS 568

  Fly   338 PSIPIDEREYTP-----------AVVMIVISGIIVSANQISRTSPFLETFAMARGSASAILDVID 391
            .::...|:.:|.           |::.:|||.:|.::..:.|...:|       ||....|..|.
Mouse   569 QNVLNAEKAFTSITLFNILRFPLAMLPMVISSVIQASVSVDRLEQYL-------GSDDLDLSAIR 626

  Fly   392 RTSLIDPLSKAGKILNYGLKGAVEFRDVFFRYPAREDVIVLRGLNVVVEEGQTVALVGPSGCGKS 456
            .....|.              ||:|.:..|.:. |:....::.:|:.::.||.||:||..|.|||
Mouse   627 HVCHFDK--------------AVQFSEASFTWD-RDLEATIQDVNLDIKPGQLVAVVGTVGSGKS 676

  Fly   457 TCIQLLQRFYDPVFGQVLLDGEDVRKYNIKWLRSNIAVVGQEPVLFQGSIGENIRHGKPEATQKE 521
            :.|..:....:.|.|.:.:.|             :||.|.|:..:..|:|.:||..|. |..:|:
Mouse   677 SLISAMLGEMENVHGHITIKG-------------SIAYVPQQAWIQNGTIKDNILFGS-EYDEKK 727

  Fly   522 VEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQRIAIARALIQQPKILLLDEATSALDYH 586
            .:...:|......:..|..|...:|.|||:.|||||:.|:::|||..|...|.:||:..||:|.|
Mouse   728 YQRVIEACALLPDLEMLPGGDMAEIGEKGINLSGGQKHRVSLARATYQDADIYILDDPLSAVDTH 792

  Fly   587 SEKLVQAALDKA------CKGRTTLVVSHRLSAIRHAHRIVYIENGKAVEQGTHEELMKLEGFY- 644
            ..|.:   .:|.      ..|:|.::|:|.:..:.....||.:..|..:|:|::.:||..:|.: 
Mouse   793 VGKHI---FNKVVGPNGLLSGKTRILVTHGIHFLPQVDEIVVLGKGTILEKGSYSDLMDKKGVFA 854

  Fly   645 --HKMVTVHS--------YDDSAEE-----LLNELEEV----AEIKERKMSYEVEPYQLGTRN-S 689
              .|....||        .:||.||     |:..:||:    |.:..|:.:.........:|: |
Mouse   855 KNWKTFMKHSGPEGEATVDNDSEEEDGDCGLIPTVEEIPDDAASLTMRRENSLRRTLSRSSRSGS 919

  Fly   690 IVSLEKNAEFQMKNLNGLANITMNQEIDDPRVPSANFIST----------FFRILGWARPEWSFL 744
            .......:..::|::|.|..  ..:.:...::....|:.|          :.:.:||    ||.|
Mouse   920 RRGKSLKSSLKIKSVNALNK--KEEVVKGQKLIKKEFVETGKVKFSIYLKYLQAVGW----WSLL 978

  Fly   745 IIGAICAGLYGVTMPVFSVVLAELYGSLAKP--TDEEVLEQSASMAIISLVIGIAAGVVCYIQTF 807
            .| .|...|..|.....::.|:.......|.  ||....::...:.:.. .:|||.|:       
Mouse   979 FI-VIFYVLNYVAFIGTNLWLSAWTSDSEKQNGTDNSPSQRDMRIGVFG-ALGIAQGI------- 1034

  Fly   808 FFNLAGVW--LTTRMRSKTFR-----CIMNQEMGWFDRKENSIGALSARLSGDAASVQGAIGFPL 865
            |...:.:|  ...|..|||..     .|:...|.:||  ....|.:..|.:||.::|...:...|
Mouse  1035 FLLSSSLWSIYACRNASKTLHRQLLTNILRAPMSFFD--TTPTGRIVNRFAGDISTVDDTLPQTL 1097

  Fly   866 SNIIQAFTNFICSIAIAFPYSWELALICLSTSPFMVASIVFEARFGEKSAL-----KEKEVLEET 925
            .:.:..|...:.:          |.:||::|..|::..|.....:......     ::...|:..
Mouse  1098 RSWLLCFFGIVST----------LVMICMATPIFIIIIIPLSILYVSVQVFYVATSRQLRRLDSV 1152

  Fly   926 SRIA-----TETITQIRTVAGLRREEELIKIYDKEVERYRHQILSRL---KWRGL-VNSLGKSLM 981
            ::..     :||::.:..:.....::..:...:|:::..:..:.|.:   :|..: :..:|..::
Mouse  1153 TKSPIYSHFSETVSGLPVIRAFEHQQRFLANSEKQIDTNQKCVFSWITSNRWLAIRLELVGNLIV 1217

  Fly   982 FFGYAVTLTYGGHMCADGKIKFETIMKISNTMLYGLFILAQSLAFTPAFN----------AALLS 1036
            |....:.:.|...:..|      |:.          |:|:.:|..|...|          ..:::
Mouse  1218 FCSALLLVIYKNSLTGD------TVG----------FVLSNALNITQTLNWLVRMTSEVETNIVA 1266

  Fly  1037 ANRMYEII----------DRKPQIQSPESFEIQQNGNGTAYKTNVVQQGVSYRGLNFSYPSRPHI 1091
            ..|:.|.|          |:||....|:..|||.|                    |:....||.:
Mouse  1267 VERINEYINVDNEAPWVTDKKPPADWPKKGEIQFN--------------------NYQVRYRPEL 1311

  Fly  1092 K-VLQNFNLDINQGQTVALVGASGSGKSTCVQLLMRYYDPDEGKILIDQESIHHDMDLKTLRRRL 1155
            . ||:....:|...:.|.:||.:|:|||:....|.|..:...|:|:||...| ..:.|..||.||
Mouse  1312 DLVLKGITCNIKSTEKVGVVGRTGAGKSSLTNCLFRILESAGGQIIIDGIDI-ASIGLHDLRGRL 1375

  Fly  1156 GIVSQEPSLFEKSIADNIGYGDTSRQVPMQQIIEAAKMANAHEFIMSLPAQYDTVLGSKGTQLSG 1220
            .|:.|:|.||..::..|:   |...:...::|..|.::|:...|:..|.......:...|..||.
Mouse  1376 TIIPQDPILFSGNLRMNL---DPFNKYSDEEIWRALELAHLKSFVAGLQLGLLHEVTEGGDNLSI 1437

  Fly  1221 GQKQRIAIARAMVRNPKILLLDEATSALDFQSERVVQQALDSACSGRTCIVIAHRLSTIQNANVI 1285
            ||:|.:.:.||::|..|||:|||||:|:|.:::.::|..:.:..|..|.|.|||||.||.:::.|
Mouse  1438 GQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRNEFSQCTVITIAHRLHTIMDSDKI 1502

  Fly  1286 CVIQAGKIVEQGSHSQLLAKNG 1307
            .|:.:|||||.||..:||:..|
Mouse  1503 MVLDSGKIVEYGSPEELLSNMG 1524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10226NP_648040.1 PTZ00265 81..1311 CDD:240339 293/1330 (22%)
ABC_membrane <147..333 CDD:279056 34/189 (18%)
ABC_MTABC3_MDL1_MDL2 414..649 CDD:213216 69/243 (28%)
ABC_membrane 749..1019 CDD:279056 45/292 (15%)
ABC_MTABC3_MDL1_MDL2 1076..1316 CDD:213216 79/233 (34%)
Abcc2NP_038834.2 MRP_assoc_pro 10..1535 CDD:188098 307/1387 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..285
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 903..927 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.