DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and NTN1

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_004813.2 Gene:NTN1 / 9423 HGNCID:8029 Length:604 Species:Homo sapiens


Alignment Length:488 Identity:146/488 - (29%)
Similarity:226/488 - (46%) Gaps:79/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVPERNHPP 90
            |.:.|.|.|:.:..::|||:.   |..||.:.....|         :.:.|..|:.:.|::.|||
Human    53 PDFVNAAFGKDVRVSSTCGRP---PARYCVVSERGEE---------RLRSCHLCNASDPKKAHPP 105

  Fly    91 ENAIDGTE----AWWQSPPLSRGMKF-NEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLEKSTD 150
            ....|...    ..|||   ...::| :.|.||::..::|.|.|:.::. .||||....:.||.|
Human   106 AFLTDLNNPHNLTCWQS---ENYLQFPHNVTLTLSLGKKFEVTYVSLQF-CSPRPESMAIYKSMD 166

  Fly   151 YGKTWTPWQHFSDTPADCETYFGKDTYKPITR--DDDVICTTEYSKIVPLENGEIPVMLLNERPS 213
            ||:||.|:|.:|   ..|...:.:....|||:  :.:.:||..::.:.||..|.|....|:.|||
Human   167 YGRTWVPFQFYS---TQCRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPS 228

  Fly   214 STNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRR--YFYSIKDISIGGRCMCN 276
            :.::.||.|||:|..||::|:...|.     |......:|.:...|  |||::.|:.:||||.||
Human   229 AHDFDNSPVLQDWVTATDIRVAFSRL-----HTFGDENEDDSELARDSYFYAVSDLQVGG
RCKCN 288

  Fly   277 GHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNE 341
            |||..| |:|....   |.|.|:|:|.|.:|:.|.|....:.|::.|......|..|||:.|:..
Human   289 GHAARC-VRDRDDS---LVCDCRHNTAGPECDRCKPFHYDRPWQR
ATAREANECVACNCNLHARR 349

  Fly   342 CKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCD 406
            |:::.|:.:      :.|. ..||||.||:|||.|.:|:.||..|||..||.......|..|.|.
Human   350 CRFNMELYK------LSGR-KSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKAC
KACDCH 407

  Fly   407 YFFSTGH-CEEETGNCECRAAFQPPSCDSCAYGYY----------------------GYPNCREC 448
            ...:.|. |.:.||.|.|:......:|:.||.||.                      ......:|
Human   408 PVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGY
QQSRSPIAPCIKIPVAPPTTAASSVEEPEDC 472

  Fly   449 ECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQ 481
            :.        :|:|..|:   .|||.. .|||:
Human   473 DS--------YCKASKGK---LKINMK-KYCKK 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 73/253 (29%)
EGF_Lam 272..>314 CDD:238012 19/41 (46%)
EGF_Lam 332..389 CDD:238012 22/56 (39%)
EGF_Lam 402..443 CDD:238012 13/63 (21%)
Laminin_EGF 448..497 CDD:395007 10/34 (29%)
Laminin_EGF 495..543 CDD:395007
Laminin_EGF 541..589 CDD:395007
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
Laminin_EGF 677..729 CDD:395007
Laminin_EGF 732..782 CDD:395007
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:395007
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:395007
Laminin_EGF 1514..1562 CDD:395007
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:395007
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2134..2385 CDD:310534
SMC_prok_B 2356..>2705 CDD:274008
Laminin_II 2566..2700 CDD:368703
LamG 2674..2843 CDD:238058
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
NTN1NP_004813.2 LamNT 46..283 CDD:214532 73/253 (29%)
EGF_Lam 284..329 CDD:238012 20/48 (42%)
Laminin_EGF 341..401 CDD:395007 25/66 (38%)
Laminin_EGF 404..>441 CDD:395007 11/36 (31%)
NTR_netrin-1_like 487..601 CDD:239634 3/8 (38%)
Cell attachment site. /evidence=ECO:0000255 530..532
Blue background indicates that the domain is not in the aligned region.

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