DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and SLK19

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_014838.3 Gene:SLK19 / 854370 SGDID:S000005721 Length:821 Species:Saccharomyces cerevisiae


Alignment Length:607 Identity:126/607 - (20%)
Similarity:228/607 - (37%) Gaps:175/607 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2121 DVTDRMRYQIDSVLEDFNSVTLAF-FTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSK--KANS 2182
            ::||:: |.::.:|....|...:. |..:|||...||.              :||:..|  |.|:
Yeast   315 ELTDQI-YHLNQMLNSLISKNESLSFQYEKLNKNHQLL--------------IDLTNEKLDKLNT 364

  Fly  2183 ELESDAKSYAKQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAA 2247
            |.|||                              :|..|..|.  :.||....::.|:.| :..
Yeast   365 ERESD------------------------------IAKVEKFKK--RIKELNTEIKVLNSN-QKI 396

  Fly  2248 ASTKIDAALEQAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQN-------KSLN 2305
            ...|.||::.:..||.|:...|...|..||::|....   .|:..:...:|..|       .:||
Yeast   397 LQEKFDASITEVNHIKGEHENTVNTLQQNEKILNDKN---VELENMKAELKGNNDKLSEYETTLN 458

  Fly  2306 ALKNDIGEFSDHLEDLFNWSEASQAKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAG- 2369
            .|.:.|.:.:|.:|            |.|:..::..|:  .||.|...  ::.|...|:..|:. 
Yeast   459 DLNSRIVQLNDKIE------------STDIVLKSKENE--LDNLKLSL--KETLSISKDFNDSDL 507

  Fly  2370 ----NFLINGDLTLNQINQKLDNLRDALNELNSFN-KNVDEELPVREDQHK----EADALTDQAE 2425
                |.||:   |.|.:.||:|:    ||.||..| |.|.::|...|:..|    |.|:|..:.:
Yeast   508 IGQINELIS---TKNNLQQKMDD----LNNLNDDNLKVVQDKLIKNEETLKLKEAEIDSLNSEMD 565

  Fly  2426 QKAAELAIKAQDL---AAQYTDMTASAEPAIKAATAYSGIVEAVEAAQKLSQDAISAAGNATDKT 2487
            :...::..|..:.   .::|..:...|:......|..:|.:|.::.::...::.|:...|...| 
Yeast   566 ELKKQITSKDDEFKMWQSKYETVEDEAKIRNAEVTELNGDIEDLKESKLHLEETITELENKVHK- 629

  Fly  2488 DGIEERAHLADTGSTDLLQRARQSLQKVQDDLEP-RLNASAGKVQKISAVNN------ATEHQLK 2545
              :|....|           .:|..:|...:||. :|..|..:.:.|..:.|      :.:::||
Yeast   630 --LENECEL-----------EKQKFEKTSLELESLQLKNSNIQAEHIKELENLHENLISLQNELK 681

  Fly  2546 DINKLIDQLPAESQRDMWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDLTNK 2610
            ..:..|..|..|::..|.:|:|.|.|..|.                          |...|..::
Yeast   682 ISSDRITTLTKENEVLMEQNNNNNNSVTLS--------------------------NDQKDRDDE 720

  Fly  2611 DVSQANKQLDD--------VEGSVSKLSELAEDI-------EEQQ----------------HRVG 2644
            .:....||:.|        .:.:..:|..||||:       .||:                .::.
Yeast   721 KIKSLGKQVQDWKEKYEAKEKDTNKRLKLLAEDLYIQYSSKHEQKVKLLKKGYENKYQNKFDQLN 785

  Fly  2645 SQSRQLGQEIENLKAQVEAARQ 2666
            .:::.|.:|||.|..|:.:.|:
Yeast   786 LENKTLSEEIEQLNKQLSSERE 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532
EGF_Lam 272..>314 CDD:238012
EGF_Lam 332..389 CDD:238012
EGF_Lam 402..443 CDD:238012
Laminin_EGF 448..497 CDD:395007
Laminin_EGF 495..543 CDD:395007
Laminin_EGF 541..589 CDD:395007
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
Laminin_EGF 677..729 CDD:395007
Laminin_EGF 732..782 CDD:395007
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:395007
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:395007
Laminin_EGF 1514..1562 CDD:395007
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:395007
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2134..2385 CDD:310534 58/265 (22%)
SMC_prok_B 2356..>2705 CDD:274008 73/362 (20%)
Laminin_II 2566..2700 CDD:368703 23/132 (17%)
LamG 2674..2843 CDD:238058
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
SLK19NP_014838.3 PTZ00482 25..>185 CDD:240433
SMC_N <356..699 CDD:481474 88/415 (21%)
Fungal_TACC 742..818 CDD:403801 14/66 (21%)
Blue background indicates that the domain is not in the aligned region.

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